RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 RAB34Q9BZG1 259 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 CUEDC2Q9H467 287 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 MAGEF1Q9HAY2 307 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 SPON1Q9HCB6 807 aa13.48□□□□□ -0.25
NPC1-214ENST00000593280 DDX25Q9UHL0 483 aaKnown RBP13.48□□□□□ -0.25
NPC1-214ENST00000593280 ASTN2O75129 1339 aaPredicted RBP13.48□□□□□ -0.25
NPC1-214ENST00000593280 H7C1D1 291 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 EDIL3O43854 480 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 TXKP42681 527 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
NPC1-214ENST00000593280 CT47A1Q5JQC4 288 aaPredicted RBP13.47□□□□□ -0.25
NPC1-214ENST00000593280 FAM160B2Q86V87 743 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 IGSF22Q8N9C0 903 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 ZNF341Q9BYN7 854 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 GINM1Q9NU53 330 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 RMND1Q9NWS8 449 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 SBF1O95248 1867 aa13.47□□□□□ -0.25
NPC1-214ENST00000593280 MEIS2O14770 477 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 PLA2G6O60733 806 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
NPC1-214ENST00000593280 CUL4BQ13620 913 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 ARHGAP27Q6ZUM4 889 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 MTRQ99707 1265 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 GLIS2Q9BZE0 524 aaPredicted RBP13.46□□□□□ -0.25
NPC1-214ENST00000593280 DEFB129Q9H1M3 183 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 BLZF1Q9H2G9 400 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 TTC12Q9H892 705 aaPredicted RBP13.46□□□□□ -0.25
NPC1-214ENST00000593280 FEM1BQ9UK73 627 aa13.46□□□□□ -0.25
NPC1-214ENST00000593280 CTNND1O60716 968 aaKnown RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 FOSP01100 380 aaPredicted RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 MYL1P05976 194 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 PLCG1P19174 1290 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 LMNB1P20700 586 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 PTGS1P23219 599 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 USP11P51784 963 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 DCAF15Q66K64 600 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 CCDC84Q86UT8 332 aaPredicted RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 TEX2Q8IWB9 1127 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 ENOX1Q8TC92 643 aaKnown RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 KIFC2Q96AC6 838 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 CALML4Q96GE6 196 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 ZNF830Q96NB3 372 aaPredicted RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 HSD3B7Q9H2F3 369 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.26
NPC1-214ENST00000593280 IFNKQ9P0W0 207 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 LRWD1Q9UFC0 647 aa13.46□□□□□ -0.26
NPC1-214ENST00000593280 DCAF8L1A6NGE4 600 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 SPDYE3A6NKU9 549 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 ZNF500O60304 480 aaPredicted RBP13.45□□□□□ -0.26
NPC1-214ENST00000593280 MARCH6O60337 910 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 RPN1P04843 607 aaKnown RBP13.45□□□□□ -0.26
NPC1-214ENST00000593280 FANCCQ00597 558 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
NPC1-214ENST00000593280 PDIA5Q14554 519 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 CCDC174Q6PII3 467 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 CCDC186Q7Z3E2 898 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 GPC2Q8N158 579 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 PLIN2Q99541 437 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 XPO4Q9C0E2 1151 aaKnown RBP13.45□□□□□ -0.26
NPC1-214ENST00000593280 KBTBD4Q9NVX7 518 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 SYNRGQ9UMZ2 1314 aa13.45□□□□□ -0.26
NPC1-214ENST00000593280 CYP3A7-CYP3A51PA0A087WV96 503 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 CBFA2T2O43439 604 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 ATP1A3P13637 1013 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 TAL1P17542 331 aaPredicted RBP13.44□□□□□ -0.26
NPC1-214ENST00000593280 CYP3A7P24462 503 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 ARHGAP4P98171 946 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 ANGEL2Q5VTE6 544 aaKnown RBP13.44□□□□□ -0.26
NPC1-214ENST00000593280 TRMT44Q8IYL2 757 aaKnown RBP13.44□□□□□ -0.26
NPC1-214ENST00000593280 LPAR1Q92633 364 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 MMTAG2Q9BU76 263 aaKnown RBP13.44□□□□□ -0.26
NPC1-214ENST00000593280 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 FANCLQ9NW38 375 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 GPRC5DQ9NZD1 345 aa13.44□□□□□ -0.26
NPC1-214ENST00000593280 RBBP6Q7Z6E9 1792 aaKnown RBP13.44□□□□□ -0.26
NPC1-214ENST00000593280 PIK3CDO00329 1044 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 OPLAHO14841 1288 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 WDR46O15213 610 aaKnown RBP13.43□□□□□ -0.26
NPC1-214ENST00000593280 SERPINC1P01008 464 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 YY1P25490 414 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 SREBF1P36956 1147 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 NBPF12Q5TAG4 269 aaPredicted RBP13.43□□□□□ -0.26
NPC1-214ENST00000593280 ZNF658Q5TYW1 1059 aaPredicted RBP13.43□□□□□ -0.26
NPC1-214ENST00000593280 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
NPC1-214ENST00000593280 TRPM4Q8TD43 1214 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 HAS1Q92839 578 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 CDK5RAP3Q96JB5 506 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 MBOAT7Q96N66 472 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 KIAA1683Q9H0B3 1180 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 NRBP1Q9UHY1 535 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
NPC1-214ENST00000593280 POTEMA6NI47 508 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 CD44P16070 742 aaKnown RBP13.42□□□□□ -0.26
NPC1-214ENST00000593280 HOXA13P31271 388 aaPredicted RBP13.42□□□□□ -0.26
NPC1-214ENST00000593280 SEMA3FQ13275 785 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms