RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TMEM199Q8N511 208 aa15.52■□□□□ 0.08
H3F3B-213ENST00000593254 HERVK_113Q902F9 699 aa15.52■□□□□ 0.08
H3F3B-213ENST00000593254 GLT1D1Q96MS3 346 aa15.52■□□□□ 0.08
H3F3B-213ENST00000593254 RANBP17Q9H2T7 1088 aaKnown RBP15.52■□□□□ 0.08
H3F3B-213ENST00000593254 A1CFQ9NQ94 594 aaKnown RBP15.52■□□□□ 0.08
H3F3B-213ENST00000593254 CXXC1Q9P0U4 656 aaPredicted RBP15.52■□□□□ 0.08
H3F3B-213ENST00000593254 MSRAQ9UJ68 235 aa15.52■□□□□ 0.08
H3F3B-213ENST00000593254 LRRC37A2A6NM11 1700 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 ARVCFO00192 962 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 ADCY6O43306 1168 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 ASGR1P07306 291 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 SNHG28P0DPA3 235 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 ALAS1P13196 640 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 BMP1P13497 986 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 IGFBP4P22692 258 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 SLC16A2P36021 539 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 SNAP25P60880 206 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
H3F3B-213ENST00000593254 FAM126BQ8IXS8 530 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 TRERF1Q96PN7 1200 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 C1QTNF1Q9BXJ1 281 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 UPF3AQ9H1J1 476 aaKnown RBP15.51■□□□□ 0.07
H3F3B-213ENST00000593254 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.51■□□□□ 0.07
H3F3B-213ENST00000593254 MYH6P13533 1939 aa15.51■□□□□ 0.07
H3F3B-213ENST00000593254 RAD50Q92878 1312 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 A0A0U1RQG5 324 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-213ENST00000593254 CD4P01730 458 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 ICAM1P05362 532 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 CNTN2Q02246 1040 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 ZNF543Q08ER8 600 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 ACVR2BQ13705 512 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 IMMTQ16891 758 aaKnown RBP15.5■□□□□ 0.07
H3F3B-213ENST00000593254 MUM1L1Q5H9M0 696 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 SYDE2Q5VT97 1194 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 ARMCX2Q7L311 632 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 DGKHQ86XP1 1220 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 PCSK9Q8NBP7 692 aaKnown RBP15.5■□□□□ 0.07
H3F3B-213ENST00000593254 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 NECAB3Q96P71 396 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-213ENST00000593254 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 ABHD16BQ9H3Z7 469 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 IL23AQ9NPF7 189 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 CTNNA3Q9UI47 895 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 ZHX1Q9UKY1 873 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-213ENST00000593254 CCPG1Q9ULG6 757 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 YBX2Q9Y2T7 364 aaKnown RBP15.5■□□□□ 0.07
H3F3B-213ENST00000593254 ARIH1Q9Y4X5 557 aaPredicted RBP15.5■□□□□ 0.07
H3F3B-213ENST00000593254 MUC6Q6W4X9 2439 aa15.5■□□□□ 0.07
H3F3B-213ENST00000593254 FRMPD2Q68DX3 1309 aaPredicted RBP15.49■□□□□ 0.07
H3F3B-213ENST00000593254 KDM4AO75164 1064 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 C6orf222P0C671 652 aaPredicted RBP15.49■□□□□ 0.07
H3F3B-213ENST00000593254 GJA9P57773 515 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 CCDC178Q5BJE1 867 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 IQCA1Q86XH1 822 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 CCDC144CPQ8IYA2 1237 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 ZKSCAN3Q9BRR0 538 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 PPP1R12CQ9BZL4 782 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 KATNBL1Q9H079 304 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 GPCPD1Q9NPB8 672 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 CYP39A1Q9NYL5 469 aa15.49■□□□□ 0.07
H3F3B-213ENST00000593254 ASTN1O14525 1302 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 BRWD1Q9NSI6 2320 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 SOWAHBA6NEL2 793 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 B4E1Z4 1266 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 CTAGE5O15320 804 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 CYP2C18P33260 490 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 NKX3-2P78367 333 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 ANKS1AQ92625 1134 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 SLC28A3Q9HAS3 691 aa15.48■□□□□ 0.07
H3F3B-213ENST00000593254 ASB14A6NK59 587 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 CHMLP26374 656 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 TFF2Q03403 129 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 GPATCH4Q5T3I0 446 aaKnown RBP15.47■□□□□ 0.07
H3F3B-213ENST00000593254 ENAHQ8N8S7 591 aaPredicted RBP15.47■□□□□ 0.07
H3F3B-213ENST00000593254 SLC43A3Q8NBI5 491 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 PNMA1Q8ND90 353 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 KRT23Q9C075 422 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
H3F3B-213ENST00000593254 MTIF3Q9H2K0 278 aaKnown RBP15.47■□□□□ 0.07
H3F3B-213ENST00000593254 CNNM2Q9H8M5 875 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 SPC25Q9HBM1 224 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 ZSWIM5Q9P217 1185 aa15.47■□□□□ 0.07
H3F3B-213ENST00000593254 TLR3O15455 904 aaKnown RBP15.46■□□□□ 0.07
H3F3B-213ENST00000593254 FGBP02675 491 aa15.46■□□□□ 0.07
H3F3B-213ENST00000593254 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
H3F3B-213ENST00000593254 GNASQ5JWF2 1037 aa15.46■□□□□ 0.07
H3F3B-213ENST00000593254 NSMFQ6X4W1 530 aa15.46■□□□□ 0.07
H3F3B-213ENST00000593254 RUFY2Q8WXA3 655 aa15.46■□□□□ 0.07
H3F3B-213ENST00000593254 VTI1AQ96AJ9 217 aa15.46■□□□□ 0.07
H3F3B-213ENST00000593254 ZSCAN10Q96SZ4 725 aaPredicted RBP15.46■□□□□ 0.07
H3F3B-213ENST00000593254 PNMA2Q9UL42 364 aa15.46■□□□□ 0.07
H3F3B-213ENST00000593254 TNKSO95271 1327 aa15.45■□□□□ 0.06
H3F3B-213ENST00000593254 WDR19Q8NEZ3 1342 aa15.45■□□□□ 0.06
H3F3B-213ENST00000593254 NFIBO00712 420 aa15.45■□□□□ 0.06
H3F3B-213ENST00000593254 GOLGA8HP0CJ92 632 aa15.45■□□□□ 0.06
H3F3B-213ENST00000593254 AAK1Q2M2I8 961 aa15.45■□□□□ 0.06
H3F3B-213ENST00000593254 OTOP2Q7RTS6 562 aa15.45■□□□□ 0.06
H3F3B-213ENST00000593254 VWCEQ96DN2 955 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms