RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 CALML3P27482 149 aa27.23■■□□□ 1.95
MBD3-211ENST00000592965 RPS6P62753 249 aaKnown RBP27.23■■□□□ 1.95
MBD3-211ENST00000592965 BEX3Q00994 111 aa27.23■■□□□ 1.95
MBD3-211ENST00000592965 C9orf50Q5SZB4 431 aa27.23■■□□□ 1.95
MBD3-211ENST00000592965 UBA5Q9GZZ9 404 aa27.23■■□□□ 1.95
MBD3-211ENST00000592965 CDC37Q16543 378 aaPredicted RBP27.22■■□□□ 1.95
MBD3-211ENST00000592965 Q7L0L9 218 aa27.22■■□□□ 1.95
MBD3-211ENST00000592965 RGS22Q8NE09 1264 aa27.22■■□□□ 1.95
MBD3-211ENST00000592965 VTI1AQ96AJ9 217 aa27.22■■□□□ 1.95
MBD3-211ENST00000592965 MAF1Q9H063 256 aa27.22■■□□□ 1.95
MBD3-211ENST00000592965 CABYRO75952 493 aa27.21■■□□□ 1.95
MBD3-211ENST00000592965 PARP1P09874 1014 aaKnown RBP27.21■■□□□ 1.95
MBD3-211ENST00000592965 DUSP28Q4G0W2 176 aa27.21■■□□□ 1.95
MBD3-211ENST00000592965 FAM109BQ6ICB4 259 aaPredicted RBP27.21■■□□□ 1.95
MBD3-211ENST00000592965 KIAA1211Q6ZU35 1233 aa27.21■■□□□ 1.95
MBD3-211ENST00000592965 DNERQ8NFT8 737 aa27.21■■□□□ 1.95
MBD3-211ENST00000592965 RBM47A0AV96 593 aaKnown RBP27.2■■□□□ 1.94
MBD3-211ENST00000592965 DYNC1LI2O43237 492 aaPredicted RBP27.2■■□□□ 1.94
MBD3-211ENST00000592965 ZEB2O60315 1214 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 EDNRBP24530 442 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 SEC23AQ15436 765 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 USH1GQ495M9 461 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 IFIT1BQ5T764 474 aaKnown RBP27.2■■□□□ 1.94
MBD3-211ENST00000592965 CXCL17Q6UXB2 119 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 FAM126BQ8IXS8 530 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 ADGRF4Q8IZF3 695 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 MPHOSPH6Q99547 160 aaKnown RBP27.2■■□□□ 1.94
MBD3-211ENST00000592965 MTMR10Q9NXD2 777 aa27.2■■□□□ 1.94
MBD3-211ENST00000592965 U3KPZ7 1027 aaPredicted RBP27.2■■□□□ 1.94
MBD3-211ENST00000592965 ABCB11O95342 1321 aa27.19■■□□□ 1.94
MBD3-211ENST00000592965 TIMP1P01033 207 aa27.19■■□□□ 1.94
MBD3-211ENST00000592965 PTGS1P23219 599 aa27.19■■□□□ 1.94
MBD3-211ENST00000592965 FPGSQ05932 587 aa27.19■■□□□ 1.94
MBD3-211ENST00000592965 TMEM63BQ5T3F8 832 aa27.19■■□□□ 1.94
MBD3-211ENST00000592965 SLC43A3Q8NBI5 491 aa27.19■■□□□ 1.94
MBD3-211ENST00000592965 CYP21A2P08686 494 aa27.18■■□□□ 1.94
MBD3-211ENST00000592965 EPHB4P54760 987 aa27.18■■□□□ 1.94
MBD3-211ENST00000592965 PTH1RQ03431 593 aa27.18■■□□□ 1.94
MBD3-211ENST00000592965 TRDNQ13061 729 aa27.18■■□□□ 1.94
MBD3-211ENST00000592965 CYB5R4Q7L1T6 521 aa27.18■■□□□ 1.94
MBD3-211ENST00000592965 SEZ6LQ9BYH1 1024 aa27.18■■□□□ 1.94
MBD3-211ENST00000592965 WDR11Q9BZH6 1224 aa27.18■■□□□ 1.94
MBD3-211ENST00000592965 TLR3O15455 904 aaKnown RBP27.17■■□□□ 1.94
MBD3-211ENST00000592965 SGSM2O43147 1006 aa27.17■■□□□ 1.94
MBD3-211ENST00000592965 PDE4DQ08499 809 aa27.17■■□□□ 1.94
MBD3-211ENST00000592965 QRICH1Q2TAL8 776 aa27.17■■□□□ 1.94
MBD3-211ENST00000592965 B4DLN1 442 aa27.16■■□□□ 1.94
MBD3-211ENST00000592965 MRPL12P52815 198 aaKnown RBP27.16■■□□□ 1.94
MBD3-211ENST00000592965 JMJD4Q9H9V9 463 aa27.16■■□□□ 1.94
MBD3-211ENST00000592965 CD4P01730 458 aa27.15■■□□□ 1.94
MBD3-211ENST00000592965 ITGA7Q13683 1181 aa27.15■■□□□ 1.94
MBD3-211ENST00000592965 MFSD5Q6N075 450 aa27.15■■□□□ 1.94
MBD3-211ENST00000592965 SCFD2Q8WU76 684 aa27.15■■□□□ 1.94
MBD3-211ENST00000592965 STXBP5LQ9Y2K9 1186 aa27.15■■□□□ 1.94
MBD3-211ENST00000592965 GRIN2DO15399 1336 aa27.15■■□□□ 1.94
MBD3-211ENST00000592965 KIAA1217Q5T5P2 1943 aa27.14■■□□□ 1.94
MBD3-211ENST00000592965 DHX16O60231 1041 aaKnown RBP27.14■■□□□ 1.94
MBD3-211ENST00000592965 SMAD3P84022 425 aaKnown RBP27.14■■□□□ 1.94
MBD3-211ENST00000592965 FBXO11Q86XK2 927 aa27.14■■□□□ 1.94
MBD3-211ENST00000592965 MCF2L2Q86YR7 1114 aa27.14■■□□□ 1.94
MBD3-211ENST00000592965 RNPC3Q96LT9 517 aaKnown RBP27.14■■□□□ 1.94
MBD3-211ENST00000592965 MRPL11Q9Y3B7 192 aaKnown RBP27.14■■□□□ 1.94
MBD3-211ENST00000592965 SCN10AQ9Y5Y9 1956 aa27.14■■□□□ 1.94
MBD3-211ENST00000592965 NKRFO15226 690 aaKnown RBP eCLIP27.13■■□□□ 1.931e-6■■■□□ 16.5
MBD3-211ENST00000592965 CPT1AP50416 773 aa27.13■■□□□ 1.93
MBD3-211ENST00000592965 PPP2R5BQ15173 497 aa27.13■■□□□ 1.93
MBD3-211ENST00000592965 STAG2Q8N3U4 1231 aa27.13■■□□□ 1.93
MBD3-211ENST00000592965 SYTL5Q8TDW5 730 aaPredicted RBP27.13■■□□□ 1.93
MBD3-211ENST00000592965 BAZ2BQ9UIF8 2168 aaKnown RBP27.13■■□□□ 1.93
MBD3-211ENST00000592965 A0A0C4DFX4 3053 aa27.13■■□□□ 1.93
MBD3-211ENST00000592965 RALYLQ86SE5 291 aaKnown RBP27.12■■□□□ 1.93
MBD3-211ENST00000592965 TBC1D5Q92609 795 aa27.12■■□□□ 1.93
MBD3-211ENST00000592965 MTMR8Q96EF0 704 aa27.12■■□□□ 1.93
MBD3-211ENST00000592965 VAT1LQ9HCJ6 419 aa27.12■■□□□ 1.93
MBD3-211ENST00000592965 POLR3EQ9NVU0 708 aa27.12■■□□□ 1.93
MBD3-211ENST00000592965 MAD2L2Q9UI95 211 aa27.12■■□□□ 1.93
MBD3-211ENST00000592965 TAF6LQ9Y6J9 622 aa27.12■■□□□ 1.93
MBD3-211ENST00000592965 PALM3A6NDB9 673 aaPredicted RBP27.11■■□□□ 1.93
MBD3-211ENST00000592965 KLRF2D3W0D1 207 aa27.11■■□□□ 1.93
MBD3-211ENST00000592965 E7EWF7 191 aa27.11■■□□□ 1.93
MBD3-211ENST00000592965 PPIGQ13427 754 aaKnown RBP eCLIP27.11■■□□□ 1.93
MBD3-211ENST00000592965 ZNF697Q5TEC3 545 aa27.11■■□□□ 1.93
MBD3-211ENST00000592965 OR6J1Q8NGC5 347 aa27.11■■□□□ 1.93
MBD3-211ENST00000592965 NCOA7Q8NI08 942 aa27.11■■□□□ 1.93
MBD3-211ENST00000592965 MAP4K1Q92918 833 aa27.11■■□□□ 1.93
MBD3-211ENST00000592965 COL20A1Q9P218 1284 aa27.11■■□□□ 1.93
MBD3-211ENST00000592965 IFIT3O14879 490 aaKnown RBP27.1■■□□□ 1.93
MBD3-211ENST00000592965 PURAQ00577 322 aaKnown RBP27.1■■□□□ 1.93
MBD3-211ENST00000592965 GRM4Q14833 912 aa27.1■■□□□ 1.93
MBD3-211ENST00000592965 NSUN6Q8TEA1 469 aaKnown RBP27.1■■□□□ 1.93
MBD3-211ENST00000592965 AMNQ9BXJ7 453 aa27.1■■□□□ 1.93
MBD3-211ENST00000592965 ERICH2A1L162 156 aa27.09■■□□□ 1.93
MBD3-211ENST00000592965 PSMC6P62333 389 aa27.09■■□□□ 1.93
MBD3-211ENST00000592965 GHRHRQ02643 423 aa27.09■■□□□ 1.93
MBD3-211ENST00000592965 SART3Q15020 963 aaKnown RBP27.09■■□□□ 1.93
MBD3-211ENST00000592965 BRDTQ58F21 947 aaPredicted RBP27.09■■□□□ 1.93
MBD3-211ENST00000592965 STOX1Q6ZVD7 989 aa27.09■■□□□ 1.93
MBD3-211ENST00000592965 TMEM199Q8N511 208 aa27.09■■□□□ 1.93
MBD3-211ENST00000592965 GUCD1Q96NT3 240 aa27.09■■□□□ 1.93
MBD3-211ENST00000592965 TAAR1Q96RJ0 339 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms