RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 COL11A2P13942 1736 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 APOBEC3HQ6NTF7 200 aaKnown RBP18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 CNNM4Q6P4Q7 775 aa18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 SV2BQ7L1I2 683 aa18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 COL23A1Q86Y22 540 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 FAM114A1Q8IWE2 563 aa18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 MASTLQ96GX5 879 aa18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 CDK5RAP3Q96JB5 506 aa18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 GREB1LQ9C091 1923 aaPredicted RBP18.57■□□□□ 0.56
PRKCSH-217ENST00000592741 PES1O00541 588 aaKnown RBP18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 KRT9P35527 623 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 ERVK-24P63145 666 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 CSGALNACT2Q8N6G5 542 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 EHD4Q9H223 541 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 SLC37A4O43826 429 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 TDP2O95551 362 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 CRKP46108 304 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 TNNI2P48788 182 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 ATP2B2Q01814 1243 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 PPP2R3AQ06190 1150 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 COBLL1Q53SF7 1204 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 CUL5Q93034 780 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 CCDC17Q96LX7 622 aa18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 DUSP9Q99956 384 aaKnown RBP18.56■□□□□ 0.56
PRKCSH-217ENST00000592741 DNM2P50570 870 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 GRB10Q13322 594 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 ZNF507Q8TCN5 953 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 ARGLU1Q9NWB6 273 aaPredicted RBP18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 MYH4Q9Y623 1939 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 RNF225M0QZC1 329 aaPredicted RBP18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 PRKCSHP14314 528 aaPredicted RBP18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 STK4Q13043 487 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 PDIA5Q14554 519 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 TTBK2Q6IQ55 1244 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 PODNQ7Z5L7 613 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 ACRBPQ8NEB7 543 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
PRKCSH-217ENST00000592741 ZBTB5O15062 677 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 PPP1R11O60927 126 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 MMP10P09238 476 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 MRPL12P52815 198 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 NFIAQ12857 509 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 UBE2SQ16763 222 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 PPP4R3AQ6IN85 833 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 FLAD1Q8NFF5 587 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 LARP4BQ92615 738 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 ZDHHC15Q96MV8 337 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 TUBGCP2Q9BSJ2 902 aa18.54■□□□□ 0.56
PRKCSH-217ENST00000592741 FCER1AP12319 257 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 CLK2P49760 499 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 TSR1Q2NL82 804 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 KRT79Q5XKE5 535 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 ANKRD40Q6AI12 368 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 OR8K1Q8NGG5 319 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 IRX2Q9BZI1 471 aaPredicted RBP18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 BLOC1S4Q9NUP1 217 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 LUC7L2Q9Y383 392 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 TTC26A0AVF1 554 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 B4DLN1 442 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 EDIL3O43854 480 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 SLC16A2P36021 539 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 ZNF569Q5MCW4 686 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 UNC13DQ70J99 1090 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 KCTD1Q719H9 257 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 SNX29Q8TEQ0 813 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 ZNF622Q969S3 477 aaKnown RBP eCLIP18.53■□□□□ 0.566e-13■□□□□ 9.9
PRKCSH-217ENST00000592741 MTMR8Q96EF0 704 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 CNOT6LQ96LI5 555 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 LRRC27Q9C0I9 530 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 DBNDD1Q9H9R9 158 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 CAPN11Q9UMQ6 739 aa18.53■□□□□ 0.56
PRKCSH-217ENST00000592741 A0A0U1RQJ8 604 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 PVALEFA0A1B0GWK0 134 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 USP17L10C9JJH3 530 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 CLCN6P51797 869 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 MCM6Q14566 821 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 KIAA0895Q8NCT3 520 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 ATRIPQ8WXE1 791 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 RAD54LQ92698 747 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 DNAJC7Q99615 494 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 NAP1L4Q99733 375 aaKnown RBP18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 NUP58Q9BVL2 599 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 GLT8D2Q9H1C3 349 aa18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 DDX25Q9UHL0 483 aaKnown RBP18.52■□□□□ 0.56
PRKCSH-217ENST00000592741 POTEMA6NI47 508 aa18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 GCFC2P16383 781 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 HOXA7P31268 230 aaPredicted RBP18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 MTIF2P46199 727 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 TUBB2AQ13885 445 aa18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 TUBB2BQ9BVA1 445 aa18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 MRIQ9BWK5 157 aa18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 PSTPIP2Q9H939 334 aa18.52■□□□□ 0.55
PRKCSH-217ENST00000592741 MYMKA6NI61 221 aa18.51■□□□□ 0.55
PRKCSH-217ENST00000592741 TMEM119Q4V9L6 283 aa18.51■□□□□ 0.55
PRKCSH-217ENST00000592741 ZFPM1Q8IX07 1006 aa18.51■□□□□ 0.55
PRKCSH-217ENST00000592741 DCAF4Q8WV16 495 aa18.51■□□□□ 0.55
PRKCSH-217ENST00000592741 SLF1Q9BQI6 1058 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms