RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 CFAP100Q494V2 611 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 ZCCHC8Q6NZY4 707 aaKnown RBP8.64□□□□□ -1.03
VMP1-215ENST00000592619 PKN3Q6P5Z2 889 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 ATL2Q8NHH9 583 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 CEP89Q96ST8 783 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 PHF20Q9BVI0 1012 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 PCDHA9Q9Y5H5 950 aa8.64□□□□□ -1.03
VMP1-215ENST00000592619 TRBV23OR9-2A0A075B6M9 112 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 ARVCFO00192 962 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 KCNA6P17658 529 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 ENDOUP21128 410 aaKnown RBP8.63□□□□□ -1.03
VMP1-215ENST00000592619 CLCN7P51798 805 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 GUCY1A3Q02108 690 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 NFIAQ12857 509 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 BRDTQ58F21 947 aaPredicted RBP8.63□□□□□ -1.03
VMP1-215ENST00000592619 RTP2Q5QGT7 225 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 CDCA2Q69YH5 1023 aaPredicted RBP8.63□□□□□ -1.03
VMP1-215ENST00000592619 RNF111Q6ZNA4 994 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 KIF18BQ86Y91 864 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 KSR1Q8IVT5 923 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 SPACA3Q8IXA5 215 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 MMP19Q99542 508 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 DBNDD2Q9BQY9 259 aa8.63□□□□□ -1.03
VMP1-215ENST00000592619 TMEFF2Q9UIK5 374 aaPredicted RBP8.63□□□□□ -1.03
VMP1-215ENST00000592619 BRINP1O60477 761 aa8.62□□□□□ -1.03
VMP1-215ENST00000592619 PARNO95453 639 aaKnown RBP8.62□□□□□ -1.03
VMP1-215ENST00000592619 PLS3P13797 630 aa8.62□□□□□ -1.03
VMP1-215ENST00000592619 SEPT7Q16181 437 aaKnown RBP8.62□□□□□ -1.03
VMP1-215ENST00000592619 CCDC103Q8IW40 242 aa8.62□□□□□ -1.03
VMP1-215ENST00000592619 TCFL5Q9UL49 500 aa8.62□□□□□ -1.03
VMP1-215ENST00000592619 PCDHA8Q9Y5H6 950 aa8.62□□□□□ -1.03
VMP1-215ENST00000592619 U3KQE9 123 aa8.62□□□□□ -1.03
VMP1-215ENST00000592619 PHLDB1Q86UU1 1377 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 WASHC2CQ9Y4E1 1318 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 GSC2O15499 205 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 KPNA6O60684 536 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 CEACAM5P06731 702 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 SYPP08247 313 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 TPP2P29144 1249 aaPredicted RBP8.61□□□□□ -1.03
VMP1-215ENST00000592619 CDKAL1Q5VV42 579 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 RNF219Q5W0B1 726 aaPredicted RBP8.61□□□□□ -1.03
VMP1-215ENST00000592619 LBX2Q6XYB7 198 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 ARHGAP27Q6ZUM4 889 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 DDX53Q86TM3 631 aaKnown RBP8.61□□□□□ -1.03
VMP1-215ENST00000592619 MTDHQ86UE4 582 aaKnown RBP8.61□□□□□ -1.03
VMP1-215ENST00000592619 Q8N3U1 123 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 DIO2Q92813 273 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 WNK4Q96J92 1243 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 HSPA12BQ96MM6 686 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 CLEC1BQ9P126 229 aa8.61□□□□□ -1.03
VMP1-215ENST00000592619 FGF10O15520 208 aaPredicted RBP8.6□□□□□ -1.03
VMP1-215ENST00000592619 GSTM1P09488 218 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 PAMP19021 973 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 STRN3Q13033 797 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 ODR4Q5SWX8 454 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 ABHD17CQ6PCB6 329 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 TMPRSS7Q7RTY8 843 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 NECAB2Q7Z6G3 386 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 UBE2Q2Q8WVN8 375 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 OSBPL1AQ9BXW6 950 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 SEMA3GQ9NS98 782 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 ATG3Q9NT62 314 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 SAMD15Q9P1V8 674 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 PLAGL2Q9UPG8 496 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 SNX11Q9Y5W9 270 aa8.6□□□□□ -1.03
VMP1-215ENST00000592619 SSU72P8A0A1W2PR75 194 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 WNT9AO14904 365 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 ZEB2O60315 1214 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 PROCP04070 461 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 BPIP17213 487 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 GUCY2FP51841 1108 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 CCDC181Q5TID7 509 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 PIK3R6Q5UE93 754 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 FAM181AQ8N9Y4 354 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 RCBTB1Q8NDN9 531 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 OR2W6PQ8NHA6 318 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 UBE2FQ969M7 185 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 PTCHD1Q96NR3 888 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 FOXP3Q9BZS1 431 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 ZSWIM5Q9P217 1185 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 CHPF2Q9P2E5 772 aa8.59□□□□□ -1.03
VMP1-215ENST00000592619 EIF4G1Q04637 1599 aaKnown RBP8.59□□□□□ -1.03
VMP1-215ENST00000592619 NPHP3-ACAD11A0A0J9YXS1 232 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 WASH4PA8MWX3 477 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 WDR64B1ANS9 1081 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 H3BS24 57 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 GPR39O43194 453 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 MSCO60682 206 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 SCNN1BP51168 640 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 PAK1Q13153 545 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 KIZQ2M2Z5 673 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 SLC51AQ86UW1 340 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 KRTAP1-3Q8IUG1 177 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 PCDH19Q8TAB3 1148 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 SHKBP1Q8TBC3 707 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 TTC1Q99614 292 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 ALG1Q9BT22 464 aa8.58□□□□□ -1.04
VMP1-215ENST00000592619 IFT22Q9H7X7 185 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms