RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 NECAB1Q8N987 351 aa23.95■■□□□ 1.42
DNMT1-227ENST00000592342 FAM133AQ8N9E0 248 aa23.95■■□□□ 1.42
DNMT1-227ENST00000592342 ARMC5Q96C12 935 aa23.95■■□□□ 1.42
DNMT1-227ENST00000592342 ZSCAN31Q96LW9 406 aaPredicted RBP23.95■■□□□ 1.42
DNMT1-227ENST00000592342 ADD3Q9UEY8 706 aaKnown RBP23.95■■□□□ 1.42
DNMT1-227ENST00000592342 LARGE1O95461 756 aa23.94■■□□□ 1.42
DNMT1-227ENST00000592342 NAPAP54920 295 aa23.94■■□□□ 1.42
DNMT1-227ENST00000592342 TBC1D5Q92609 795 aa23.94■■□□□ 1.42
DNMT1-227ENST00000592342 CUL5Q93034 780 aa23.94■■□□□ 1.42
DNMT1-227ENST00000592342 GTF3C6Q969F1 213 aa23.94■■□□□ 1.42
DNMT1-227ENST00000592342 GCOM1H8Y6P7 765 aaPredicted RBP23.93■■□□□ 1.42
DNMT1-227ENST00000592342 POLR2MP0CAP2 368 aa23.93■■□□□ 1.42
DNMT1-227ENST00000592342 SCG2P13521 617 aa23.93■■□□□ 1.42
DNMT1-227ENST00000592342 CYP2C19P33261 490 aa23.93■■□□□ 1.42
DNMT1-227ENST00000592342 PFKFB3Q16875 520 aaPredicted RBP23.93■■□□□ 1.42
DNMT1-227ENST00000592342 WWC2Q6AWC2 1192 aa23.93■■□□□ 1.42
DNMT1-227ENST00000592342 ZNF467Q7Z7K2 595 aaPredicted RBP23.93■■□□□ 1.42
DNMT1-227ENST00000592342 SAMD3Q8N6K7 520 aa23.93■■□□□ 1.42
DNMT1-227ENST00000592342 ZNF333Q96JL9 665 aa23.93■■□□□ 1.42
DNMT1-227ENST00000592342 MPHOSPH6Q99547 160 aaKnown RBP23.93■■□□□ 1.42
DNMT1-227ENST00000592342 TINF2Q9BSI4 451 aa23.93■■□□□ 1.42
DNMT1-227ENST00000592342 MAP3K20Q9NYL2 800 aaKnown RBP23.93■■□□□ 1.42
DNMT1-227ENST00000592342 ASB14A6NK59 587 aa23.92■■□□□ 1.42
DNMT1-227ENST00000592342 PRKAR2AP13861 404 aaKnown RBP23.92■■□□□ 1.42
DNMT1-227ENST00000592342 TRIM32Q13049 653 aa23.92■■□□□ 1.42
DNMT1-227ENST00000592342 MSL3Q8N5Y2 521 aaKnown RBP23.92■■□□□ 1.42
DNMT1-227ENST00000592342 SYTL5Q8TDW5 730 aaPredicted RBP23.92■■□□□ 1.42
DNMT1-227ENST00000592342 PURBQ96QR8 312 aaKnown RBP23.92■■□□□ 1.42
DNMT1-227ENST00000592342 SH2B1Q9NRF2 756 aaPredicted RBP23.92■■□□□ 1.42
DNMT1-227ENST00000592342 SMCHD1A6NHR9 2005 aa23.92■■□□□ 1.42
DNMT1-227ENST00000592342 ZNFX1Q9P2E3 1918 aaKnown RBP23.91■■□□□ 1.42
DNMT1-227ENST00000592342 SOWAHBA6NEL2 793 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 OPLAHO14841 1288 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 DEXIO95424 95 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 HOXA13P31271 388 aaPredicted RBP23.91■■□□□ 1.42
DNMT1-227ENST00000592342 HSD17B4P51659 736 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 PPP1R18Q6NYC8 613 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 SMARCC2Q8TAQ2 1214 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 CCDC12Q8WUD4 166 aaPredicted RBP23.91■■□□□ 1.42
DNMT1-227ENST00000592342 PSTPIP2Q9H939 334 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 BARHL2Q9NY43 387 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 CNPY2Q9Y2B0 182 aa23.91■■□□□ 1.42
DNMT1-227ENST00000592342 B4DLN1 442 aa23.9■■□□□ 1.42
DNMT1-227ENST00000592342 MCM2P49736 904 aa23.9■■□□□ 1.42
DNMT1-227ENST00000592342 ALDH5A1P51649 535 aaPredicted RBP23.9■■□□□ 1.42
DNMT1-227ENST00000592342 MRPL12P52815 198 aaKnown RBP23.9■■□□□ 1.42
DNMT1-227ENST00000592342 CACNB2Q08289 660 aaPredicted RBP23.9■■□□□ 1.42
DNMT1-227ENST00000592342 MAMDC4Q6UXC1 1216 aa23.9■■□□□ 1.42
DNMT1-227ENST00000592342 ARMCX2Q7L311 632 aa23.9■■□□□ 1.42
DNMT1-227ENST00000592342 DNERQ8NFT8 737 aa23.9■■□□□ 1.42
DNMT1-227ENST00000592342 FGD4Q96M96 766 aa23.9■■□□□ 1.42
DNMT1-227ENST00000592342 TMEM106CQ9BVX2 250 aa23.9■■□□□ 1.42
DNMT1-227ENST00000592342 HMX1Q9NP08 348 aaPredicted RBP23.9■■□□□ 1.42
DNMT1-227ENST00000592342 RPTORQ8N122 1335 aa23.89■■□□□ 1.42
DNMT1-227ENST00000592342 SYNGAP1Q96PV0 1343 aa23.89■■□□□ 1.42
DNMT1-227ENST00000592342 CCDC85CA6NKD9 419 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 STXBP3O00186 592 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 GHRHRQ02643 423 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 MTFR1Q15390 333 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 PKN1Q16512 942 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 FCHSD1Q86WN1 690 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 CCDC83Q8IWF9 413 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 TAAR1Q96RJ0 339 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 RNF208Q9H0X6 261 aa23.89■■□□□ 1.41
DNMT1-227ENST00000592342 CCL5P13501 91 aa23.88■■□□□ 1.41
DNMT1-227ENST00000592342 CNGA1P29973 690 aa23.88■■□□□ 1.41
DNMT1-227ENST00000592342 ARHGEF16Q5VV41 709 aa23.88■■□□□ 1.41
DNMT1-227ENST00000592342 CCDC148Q8NFR7 591 aa23.88■■□□□ 1.41
DNMT1-227ENST00000592342 NSUN6Q8TEA1 469 aaKnown RBP23.88■■□□□ 1.41
DNMT1-227ENST00000592342 RMDN3Q96TC7 470 aa23.88■■□□□ 1.41
DNMT1-227ENST00000592342 UNC93B1Q9H1C4 597 aa23.88■■□□□ 1.41
DNMT1-227ENST00000592342 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.88■■□□□ 1.41
DNMT1-227ENST00000592342 COL20A1Q9P218 1284 aa23.88■■□□□ 1.41
DNMT1-227ENST00000592342 PLXNA1Q9UIW2 1896 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 LOC102724159A0A0B4J2E5 919 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 SMCO2A6NFE2 343 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 ADCY7P51828 1080 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 PWP2Q15269 919 aaKnown RBP23.87■■□□□ 1.41
DNMT1-227ENST00000592342 MAP3K21Q5TCX8 1036 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 USP17L6PQ6QN14 398 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 WASF1Q92558 559 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 GLT8D2Q9H1C3 349 aa23.87■■□□□ 1.41
DNMT1-227ENST00000592342 ORC3Q9UBD5 711 aaPredicted RBP23.87■■□□□ 1.41
DNMT1-227ENST00000592342 ZHX1Q9UKY1 873 aaPredicted RBP23.87■■□□□ 1.41
DNMT1-227ENST00000592342 STK36Q9NRP7 1315 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 RBBP6Q7Z6E9 1792 aaKnown RBP23.86■■□□□ 1.41
DNMT1-227ENST00000592342 CTDNEP1O95476 244 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 IGHA2P01877 340 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 PDE4DQ08499 809 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 PRAMEF19Q5SWL8 479 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 TYW1BQ6NUM6 668 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.86■■□□□ 1.413e-6■■□□□ 14.4
DNMT1-227ENST00000592342 ABHD16BQ9H3Z7 469 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 C6orf50Q9HD87 102 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 NRBP1Q9UHY1 535 aa23.86■■□□□ 1.41
DNMT1-227ENST00000592342 ASTN1O14525 1302 aa23.85■■□□□ 1.41
DNMT1-227ENST00000592342 PIK3CDO00329 1044 aa23.85■■□□□ 1.41
DNMT1-227ENST00000592342 CD2BP2O95400 341 aaKnown RBP23.85■■□□□ 1.41
DNMT1-227ENST00000592342 SNAI1O95863 264 aaPredicted RBP23.85■■□□□ 1.41
DNMT1-227ENST00000592342 CYBAP13498 195 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms