RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 SH3RF1Q7Z6J0 888 aa9.1□□□□□ -0.95
SDF2-210ENST00000592250 CATIPQ7Z7H3 387 aa9.1□□□□□ -0.95
SDF2-210ENST00000592250 ANKRD13AQ8IZ07 590 aa9.1□□□□□ -0.95
SDF2-210ENST00000592250 MKL1Q969V6 931 aa9.1□□□□□ -0.95
SDF2-210ENST00000592250 DDX11Q96FC9 970 aa9.1□□□□□ -0.95
SDF2-210ENST00000592250 WRNIP1Q96S55 665 aa9.1□□□□□ -0.95
SDF2-210ENST00000592250 ZNF341Q9BYN7 854 aa9.1□□□□□ -0.95
SDF2-210ENST00000592250 ORC3Q9UBD5 711 aaPredicted RBP9.1□□□□□ -0.95
SDF2-210ENST00000592250 TCHHQ07283 1943 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 CCDC196A0A1B0GTZ2 297 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 FAM196BA6NMK8 535 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 TOP1P11387 765 aaKnown RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 IREB2P48200 963 aaKnown RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 NOGQ13253 232 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 VGLL4Q14135 290 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 PKN1Q16512 942 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 SHROOM1Q2M3G4 852 aaPredicted RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 TMEM259Q4ZIN3 620 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 NOL9Q5SY16 702 aaKnown RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 RGMBQ6NW40 437 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 TMTC3Q6ZXV5 915 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 CCDC144CPQ8IYA2 1237 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 SRBD1Q8N5C6 995 aaKnown RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 PNMA1Q8ND90 353 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 ZKSCAN4Q969J2 545 aaPredicted RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 SHISA4Q96DD7 197 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 CLMNQ96JQ2 1002 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.09□□□□□ -0.95
SDF2-210ENST00000592250 RBM28Q9NW13 759 aaKnown RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 NYAP2Q9P242 653 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 MAD2L2Q9UI95 211 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 FKBPLQ9UIM3 349 aa9.09□□□□□ -0.95
SDF2-210ENST00000592250 NAP1L2Q9ULW6 460 aaPredicted RBP9.09□□□□□ -0.95
SDF2-210ENST00000592250 FAM155AB1AL88 458 aaPredicted RBP9.08□□□□□ -0.96
SDF2-210ENST00000592250 CPLX1O14810 134 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 PRPF3O43395 683 aaKnown RBP9.08□□□□□ -0.96
SDF2-210ENST00000592250 CTNND1O60716 968 aaKnown RBP9.08□□□□□ -0.96
SDF2-210ENST00000592250 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 TRPA1O75762 1119 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 CDKL5O76039 1030 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 PLEKHA8P1O95397 391 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 SMARCA1P28370 1054 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 INPP5BP32019 993 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 RESTQ13127 1097 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 ARID5BQ14865 1188 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 CERKLQ49MI3 558 aaPredicted RBP9.08□□□□□ -0.96
SDF2-210ENST00000592250 CPLX2Q6PUV4 134 aaKnown RBP9.08□□□□□ -0.96
SDF2-210ENST00000592250 RASAL3Q86YV0 1011 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 STAG2Q8N3U4 1231 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 FBXO18Q8NFZ0 1043 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 NUP133Q8WUM0 1156 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 GPKOWQ92917 476 aaPredicted RBP eCLIP9.08□□□□□ -0.96
SDF2-210ENST00000592250 PHKBQ93100 1093 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 CHAMP1Q96JM3 812 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 AIFM3Q96NN9 605 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 CDK15Q96Q40 435 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 RNF26Q9BY78 433 aaPredicted RBP9.08□□□□□ -0.96
SDF2-210ENST00000592250 KAT14Q9H8E8 782 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 SNCAIPQ9Y6H5 919 aa9.08□□□□□ -0.96
SDF2-210ENST00000592250 CNTNAP5Q8WYK1 1306 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 MYH6P13533 1939 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 MYH4Q9Y623 1939 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 CYTH3O43739 400 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 TTLL1O95922 423 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 CAP2P40123 477 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 ZNF157P51786 506 aaPredicted RBP9.07□□□□□ -0.96
SDF2-210ENST00000592250 KIF23Q02241 960 aaPredicted RBP9.07□□□□□ -0.96
SDF2-210ENST00000592250 SSRP1Q08945 709 aaKnown RBP9.07□□□□□ -0.96
SDF2-210ENST00000592250 PDXDC2PQ6P474 469 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 TMEM179Q6ZVK1 233 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 CLEC10AQ8IUN9 316 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 CMTR1Q8N1G2 835 aaKnown RBP9.07□□□□□ -0.96
SDF2-210ENST00000592250 FAM184AQ8NB25 1140 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 C1QTNF2Q9BXJ5 285 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 KANSL2Q9H9L4 492 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 GJB4Q9NTQ9 266 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 SYNPO2Q9UMS6 1093 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 KIF3AQ9Y496 699 aa9.07□□□□□ -0.96
SDF2-210ENST00000592250 DOCK1Q14185 1865 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 BAZ2BQ9UIF8 2168 aaKnown RBP9.06□□□□□ -0.96
SDF2-210ENST00000592250 DEXIO95424 95 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 ZBTB48P10074 688 aaPredicted RBP9.06□□□□□ -0.96
SDF2-210ENST00000592250 PDHBP11177 359 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 EEF2P13639 858 aaKnown RBP9.06□□□□□ -0.96
SDF2-210ENST00000592250 PTPRAP18433 802 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 KIF5BP33176 963 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 SEPT2Q15019 361 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 ABCB5Q2M3G0 1257 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 FOXD4L5Q5VV16 416 aaPredicted RBP9.06□□□□□ -0.96
SDF2-210ENST00000592250 OTUD7BQ6GQQ9 843 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 RASGRP2Q7LDG7 609 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 ERO1BQ86YB8 467 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 TMEM87AQ8NBN3 555 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 CTCFLQ8NI51 663 aaPredicted RBP9.06□□□□□ -0.96
SDF2-210ENST00000592250 FOXD4L4Q8WXT5 416 aaPredicted RBP9.06□□□□□ -0.96
SDF2-210ENST00000592250 OPTNQ96CV9 577 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 SLC10A4Q96EP9 437 aa9.06□□□□□ -0.96
SDF2-210ENST00000592250 GBP4Q96PP9 640 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms