RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 FBXO16Q8IX29 292 aaPredicted RBP31.66■■■□□ 2.66
SMAD4-213ENST00000591914 C11orf97A0A1B0GVM6 126 aaPredicted RBP31.65■■■□□ 2.66
SMAD4-213ENST00000591914 GJA9P57773 515 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 TNFAIP2Q03169 654 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 EEPD1Q7L9B9 569 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 MCF2L2Q86YR7 1114 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 RASEFQ8IZ41 740 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 NUP133Q8WUM0 1156 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 TBC1D5Q92609 795 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 FERMT2Q96AC1 680 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 PRO3102Q9H379 93 aa31.65■■■□□ 2.66
SMAD4-213ENST00000591914 ZMYND8Q9ULU4 1186 aaPredicted RBP31.65■■■□□ 2.66
SMAD4-213ENST00000591914 EDNRBP24530 442 aa31.64■■■□□ 2.66
SMAD4-213ENST00000591914 NKX3-2P78367 333 aa31.64■■■□□ 2.66
SMAD4-213ENST00000591914 HABP4Q5JVS0 413 aaKnown RBP31.64■■■□□ 2.66
SMAD4-213ENST00000591914 NEK1Q96PY6 1258 aa31.64■■■□□ 2.66
SMAD4-213ENST00000591914 MYL10Q9BUA6 226 aa31.64■■■□□ 2.66
SMAD4-213ENST00000591914 PDGFCQ9NRA1 345 aa31.64■■■□□ 2.66
SMAD4-213ENST00000591914 GNEQ9Y223 722 aaKnown RBP31.64■■■□□ 2.66
SMAD4-213ENST00000591914 MYADML2A6NDP7 307 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 CCDC69A6NI79 296 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 OPLAHO14841 1288 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 RTP1P59025 263 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 C1orf53Q5VUE5 145 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 IQSEC1Q6DN90 963 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 NFXL1Q6ZNB6 911 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 CTCFLQ8NI51 663 aaPredicted RBP31.63■■■□□ 2.65
SMAD4-213ENST00000591914 SYTL5Q8TDW5 730 aaPredicted RBP31.63■■■□□ 2.65
SMAD4-213ENST00000591914 PIGSQ96S52 555 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 SPC25Q9HBM1 224 aa31.63■■■□□ 2.65
SMAD4-213ENST00000591914 A0A1W2PQ45 241 aaPredicted RBP31.62■■■□□ 2.65
SMAD4-213ENST00000591914 A0A1W2PQY0 241 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 MOXD2PA6NHM9 499 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 C6orf222P0C671 652 aaPredicted RBP31.62■■■□□ 2.65
SMAD4-213ENST00000591914 SYN1P17600 705 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 KIF5BP33176 963 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 ACLYP53396 1101 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 IRX5P78411 483 aaPredicted RBP31.62■■■□□ 2.65
SMAD4-213ENST00000591914 GHRHRQ02643 423 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 KRT32Q14532 448 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 KCNA10Q16322 511 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 HOMER1Q86YM7 354 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 MPHOSPH6Q99547 160 aaKnown RBP31.62■■■□□ 2.65
SMAD4-213ENST00000591914 LRRC2Q9BYS8 371 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 PCDHA1Q9Y5I3 950 aa31.62■■■□□ 2.65
SMAD4-213ENST00000591914 BAZ2BQ9UIF8 2168 aaKnown RBP31.61■■■□□ 2.65
SMAD4-213ENST00000591914 CTAGE5O15320 804 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 SMPD1P17405 629 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 TRAF1Q13077 416 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 ADCK5Q3MIX3 580 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 SGMS1Q86VZ5 419 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 KCNB2Q92953 911 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 SPZ1Q9BXG8 430 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 COL20A1Q9P218 1284 aa31.61■■■□□ 2.65
SMAD4-213ENST00000591914 PNMA6FA0A0J9YX94 578 aa31.6■■■□□ 2.65
SMAD4-213ENST00000591914 EXOSC10Q01780 885 aaKnown RBP31.6■■■□□ 2.65
SMAD4-213ENST00000591914 PDE4DQ08499 809 aa31.6■■■□□ 2.65
SMAD4-213ENST00000591914 RBM27Q9P2N5 1060 aaKnown RBP31.6■■■□□ 2.65
SMAD4-213ENST00000591914 RBM47A0AV96 593 aaKnown RBP31.59■■■□□ 2.65
SMAD4-213ENST00000591914 B4DLN1 442 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 CALM1P0DP23 149 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 CALM2P0DP24 149 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 CALM3P0DP25 149 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 SMARCA1P28370 1054 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 HSD17B4P51659 736 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 MRPL12P52815 198 aaKnown RBP31.59■■■□□ 2.65
SMAD4-213ENST00000591914 NOL8Q76FK4 1167 aaKnown RBP31.59■■■□□ 2.65
SMAD4-213ENST00000591914 DHX32Q7L7V1 743 aaKnown RBP31.59■■■□□ 2.65
SMAD4-213ENST00000591914 TLK2Q86UE8 772 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 PCSK9Q8NBP7 692 aaKnown RBP31.59■■■□□ 2.65
SMAD4-213ENST00000591914 ATP11BQ9Y2G3 1177 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 Q9Y3F1 56 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 SLC12A7Q9Y666 1083 aa31.59■■■□□ 2.65
SMAD4-213ENST00000591914 REC8O95072 547 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 HSPA4P34932 840 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 TRIM60Q495X7 471 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 GNASQ5JWF2 1037 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 TMEM63BQ5T3F8 832 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 TAAR1Q96RJ0 339 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 GDF15Q99988 308 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 LZTS2Q9BRK4 669 aa31.58■■■□□ 2.65
SMAD4-213ENST00000591914 CFBP00751 764 aa31.57■■■□□ 2.64
SMAD4-213ENST00000591914 GNAQP50148 359 aa31.57■■■□□ 2.64
SMAD4-213ENST00000591914 DUSP28Q4G0W2 176 aa31.57■■■□□ 2.64
SMAD4-213ENST00000591914 NSUN6Q8TEA1 469 aaKnown RBP31.57■■■□□ 2.64
SMAD4-213ENST00000591914 MAP3K20Q9NYL2 800 aaKnown RBP31.57■■■□□ 2.64
SMAD4-213ENST00000591914 ASGR1P07306 291 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 PTGS1P23219 599 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 SAMD3Q8N6K7 520 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 RMDN3Q96TC7 470 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 WDR11Q9BZH6 1224 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 AP5M1Q9H0R1 490 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 STARD7Q9NQZ5 370 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 TRIOBPQ9H2D6 2365 aa31.56■■■□□ 2.64
SMAD4-213ENST00000591914 PLEKHA8P1O95397 391 aa31.55■■■□□ 2.64
SMAD4-213ENST00000591914 HMGB1P09429 215 aaKnown RBP31.55■■■□□ 2.64
SMAD4-213ENST00000591914 RXRAP19793 462 aa31.55■■■□□ 2.64
SMAD4-213ENST00000591914 SRBD1Q8N5C6 995 aaKnown RBP31.55■■■□□ 2.64
SMAD4-213ENST00000591914 TCEANC2Q96MN5 208 aa31.55■■■□□ 2.64
SMAD4-213ENST00000591914 IWS1Q96ST2 819 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms