RNA–Protein interactions for RNA: ENST00000591472.6

SEPT9-238, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-238	ENST00000591472	USP6NL	Q92738	828 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	NUDT12	Q9BQG2	462 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	ZMYND12	Q9H0C1	365 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	GLT8D2	Q9H1C3	349 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	PSTPIP2	Q9H939	334 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	VPS54	Q9P1Q0	977 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	SRRD	Q9UH36	339 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	GJD2	Q9UKL4	321 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	SMC3	Q9UQE7	1217 aa		13.8	□□□□□ -0.2
SEPT9-238	ENST00000591472	DNAJC25-GNG10	A0A024R161	153 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	SMCO2	A6NFE2	343 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	PIK3CD	O00329	1044 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	CFB	P00751	764 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	POLR2M	P0CAP2	368 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	RGS2	P41220	211 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	HSD17B4	P51659	736 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	MRPL12	P52815	198 aa	Known RBP	13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	PRMT2	P55345	433 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	BAAT	Q14032	418 aa	Predicted RBP	13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	SLC30A10	Q6XR72	485 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	OTOP1	Q7RTM1	612 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	DPP9	Q86TI2	863 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	TBC1D5	Q92609	795 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	CUL5	Q93034	780 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	C6orf50	Q9HD87	102 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	RIC8A	Q9NPQ8	531 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	SLC5A4	Q9NY91	659 aa		13.79	□□□□□ -0.2
SEPT9-238	ENST00000591472	PLXNA1	Q9UIW2	1896 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	POTEB2	H3BUK9	544 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	PGK2	P07205	417 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	HSP90AA1	P07900	732 aa	Known RBP	13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	HOXC6	P09630	235 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	CALML3	P27482	149 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	GJB2	P29033	226 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	GNA11	P29992	359 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	FLT3LG	P49771	235 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	NLRP5	P59047	1200 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	RPS6	P62753	249 aa	Known RBP	13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	PRKCZ	Q05513	592 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	TRIM29	Q14134	588 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	GALNT17	Q6IS24	598 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	FAM133A	Q8N9E0	248 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	BICD2	Q8TD16	824 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	APBA2	Q99767	749 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	PRDM10	Q9NQV6	1147 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	GABRQ	Q9UN88	632 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	TRIM17	Q9Y577	477 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	LCT	P09848	1927 aa		13.78	□□□□□ -0.2
SEPT9-238	ENST00000591472	MEIS2	O14770	477 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	COBL	O75128	1261 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	XRCC5	P13010	732 aa	Known RBP	13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	HOXA13	P31271	388 aa	Predicted RBP	13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	ANP32A	P39687	249 aa	Known RBP	13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	CNTN2	Q02246	1040 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	IRF5	Q13568	498 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	ZNF792	Q3KQV3	632 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	USP17L6P	Q6QN14	398 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	CTU1	Q7Z7A3	348 aa	Known RBP	13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	DAGLB	Q8NCG7	672 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	C8orf76	Q96K31	380 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	PHF20	Q9BVI0	1012 aa		13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	DIS3	Q9Y2L1	958 aa	Known RBP	13.77	□□□□□ -0.21
SEPT9-238	ENST00000591472	CYP2B6	P20813	491 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	UBE2S	Q16763	222 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	KRT40	Q6A162	431 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	MCTP2	Q6DN12	878 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	TRMT44	Q8IYL2	757 aa	Known RBP	13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	REXO1	Q8N1G1	1221 aa	Known RBP	13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	DNER	Q8NFT8	737 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	RAET1E	Q8TD07	263 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	IPO9	Q96P70	1041 aa	Known RBP	13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	GJB4	Q9NTQ9	266 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	COL20A1	Q9P218	1284 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	ADD3	Q9UEY8	706 aa	Known RBP	13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	PCDHA4	Q9UN74	947 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	KCNJ14	Q9UNX9	436 aa		13.76	□□□□□ -0.21
SEPT9-238	ENST00000591472	LOC102724159	A0A0B4J2E5	919 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	SOWAHB	A6NEL2	793 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	FOS	P01100	380 aa	Predicted RBP	13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	CLK2	P49760	499 aa	Known RBP	13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	FOSB	P53539	338 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	AP3B2	Q13367	1082 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	PWP2	Q15269	919 aa	Known RBP	13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	NPY5R	Q15761	445 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	OLFML2B	Q68BL8	750 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	FCHSD1	Q86WN1	690 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	BLID	Q8IZY5	108 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	FBXO18	Q8NFZ0	1043 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	NPLOC4	Q8TAT6	608 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	MAML3	Q96JK9	1138 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	FGD4	Q96M96	766 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	TAAR1	Q96RJ0	339 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	BRMS1	Q9HCU9	246 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	FOXD4L1	Q9NU39	408 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	PTPN22	Q9Y2R2	807 aa		13.75	□□□□□ -0.21
SEPT9-238	ENST00000591472	ASB14	A6NK59	587 aa		13.74	□□□□□ -0.21
SEPT9-238	ENST00000591472	SPDYE3	A6NKU9	549 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms