RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 PPP2R5BQ15173 497 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 QRICH1Q2TAL8 776 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 ZNF792Q3KQV3 632 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 USH1GQ495M9 461 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 NSMFQ6X4W1 530 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
APOC1-204ENST00000589078 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 MCF2L2Q86YR7 1114 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 FANCBQ8NB91 859 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 NPLOC4Q8TAT6 608 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
APOC1-204ENST00000589078 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.61
APOC1-204ENST00000589078 TCEANC2Q96MN5 208 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
APOC1-204ENST00000589078 MYL10Q9BUA6 226 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 AMNQ9BXJ7 453 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 MAF1Q9H063 256 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 CPVLQ9H3G5 476 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 JMJD4Q9H9V9 463 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 A1CFQ9NQ94 594 aaKnown RBP11.21□□□□□ -0.61
APOC1-204ENST00000589078 FLRT1Q9NZU1 646 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 DDX20Q9UHI6 824 aaKnown RBP11.21□□□□□ -0.61
APOC1-204ENST00000589078 NRBP1Q9UHY1 535 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 CNPY2Q9Y2B0 182 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 ATP11BQ9Y2G3 1177 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 REV3LO60673 3130 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 DNAJC25-GNG10A0A024R161 153 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 KLF18A0A0U1RQI7 1052 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 PTPDC1A2A3K4 754 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 B4DLN1 442 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 DNM1LO00429 736 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 MSCO60682 206 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 CNGA1P29973 690 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 CYP2C19P33261 490 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 MRPL12P52815 198 aaKnown RBP11.2□□□□□ -0.62
APOC1-204ENST00000589078 SMAD3P84022 425 aaKnown RBP11.2□□□□□ -0.62
APOC1-204ENST00000589078 RTN1Q16799 776 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 Q6ZUG5 572 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 RUFY3Q7L099 469 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 FBXL16Q8N461 479 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 TINF2Q9BSI4 451 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 SPZ1Q9BXG8 430 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 UPF2Q9HAU5 1272 aaKnown RBP11.2□□□□□ -0.62
APOC1-204ENST00000589078 ZSWIM6Q9HCJ5 1215 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 PRDM5Q9NQX1 630 aaPredicted RBP11.2□□□□□ -0.62
APOC1-204ENST00000589078 CYP39A1Q9NYL5 469 aa11.2□□□□□ -0.62
APOC1-204ENST00000589078 ADD3Q9UEY8 706 aaKnown RBP11.2□□□□□ -0.62
APOC1-204ENST00000589078 ZNF236Q9UL36 1845 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 PNMA6FA0A0J9YX94 578 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 ASB14A6NK59 587 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 GOLGA8AA7E2F4 631 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 GOLGA8BA8MQT2 603 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 METAP2P50579 478 aaKnown RBP eCLIP11.19□□□□□ -0.62
APOC1-204ENST00000589078 MUM1L1Q5H9M0 696 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 RNF207Q6ZRF8 634 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 CCDC144CPQ8IYA2 1237 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 BADQ92934 168 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 BRF1Q92994 677 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 MTMR8Q96EF0 704 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 RAPGEFL1Q9UHV5 662 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 XIRP2A4UGR9 3374 aa11.19□□□□□ -0.62
APOC1-204ENST00000589078 LOC102724159A0A0B4J2E5 919 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 TNFRSF10AO00220 468 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 NFIBO00712 420 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 CPA1P15085 419 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 RXRAP19793 462 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 CALML3P27482 149 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 BAATQ14032 418 aaPredicted RBP11.18□□□□□ -0.62
APOC1-204ENST00000589078 COL9A3Q14050 684 aaPredicted RBP11.18□□□□□ -0.62
APOC1-204ENST00000589078 PWP2Q15269 919 aaKnown RBP11.18□□□□□ -0.62
APOC1-204ENST00000589078 TJAP1Q5JTD0 557 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 GJC2Q5T442 439 aaPredicted RBP11.18□□□□□ -0.62
APOC1-204ENST00000589078 MAMDC4Q6UXC1 1216 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 TMTC3Q6ZXV5 915 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 FAM133AQ8N9E0 248 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 USP38Q8NB14 1042 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 CLEC4DQ8WXI8 215 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 PIGSQ96S52 555 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 PDRG1Q9NUG6 133 aa11.18□□□□□ -0.62
APOC1-204ENST00000589078 CYTH3O43739 400 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 CYBAP13498 195 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 TAL1P17542 331 aaPredicted RBP11.17□□□□□ -0.62
APOC1-204ENST00000589078 RPS6P62753 249 aaKnown RBP11.17□□□□□ -0.62
APOC1-204ENST00000589078 CNTN2Q02246 1040 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 APOBRQ0VD83 1088 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 ANKRD1Q15327 319 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 RAB11FIP4Q86YS3 637 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 SRBD1Q8N5C6 995 aaKnown RBP11.17□□□□□ -0.62
APOC1-204ENST00000589078 SAMD3Q8N6K7 520 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 TRPV1Q8NER1 839 aa11.17□□□□□ -0.62
APOC1-204ENST00000589078 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms