RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 IRF5Q13568 498 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 BAATQ14032 418 aaPredicted RBP12.79□□□□□ -0.36
CDK3-204ENST00000588812 TRMT44Q8IYL2 757 aaKnown RBP12.79□□□□□ -0.36
CDK3-204ENST00000588812 CCDC148Q8NFR7 591 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 RAET1EQ8TD07 263 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 CUL5Q93034 780 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 APBA2Q99767 749 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 PSTPIP2Q9H939 334 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 GABRQQ9UN88 632 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 DIS3Q9Y2L1 958 aaKnown RBP12.79□□□□□ -0.36
CDK3-204ENST00000588812 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.79□□□□□ -0.36
CDK3-204ENST00000588812 SMCHD1A6NHR9 2005 aa12.79□□□□□ -0.36
CDK3-204ENST00000588812 HTTP42858 3142 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 ESYT2A0FGR8 921 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 OPLAHO14841 1288 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 JAK2O60674 1132 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 COBLO75128 1261 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 PGK2P07205 417 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 FDPSP14324 419 aaKnown RBP12.78□□□□□ -0.36
CDK3-204ENST00000588812 CYP2B6P20813 491 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 CALML3P27482 149 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 GNA11P29992 359 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 HSD17B4P51659 736 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 CUL4AQ13619 759 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 ZNF792Q3KQV3 632 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 TBC1D5Q92609 795 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 C6orf50Q9HD87 102 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 ADD3Q9UEY8 706 aaKnown RBP12.78□□□□□ -0.36
CDK3-204ENST00000588812 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 DOCK3Q8IZD9 2030 aa12.78□□□□□ -0.36
CDK3-204ENST00000588812 ZSWIM8A7E2V4 1837 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 PLXNB2O15031 1838 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 SMCO2A6NFE2 343 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 PIK3CDO00329 1044 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 ADCY7P51828 1080 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 GALNT17Q6IS24 598 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 TYW1BQ6NUM6 668 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 SLC30A10Q6XR72 485 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 ZNF467Q7Z7K2 595 aaPredicted RBP12.77□□□□□ -0.37
CDK3-204ENST00000588812 FAM133AQ8N9E0 248 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 FAM184AQ8NB25 1140 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 DNERQ8NFT8 737 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 BICD2Q8TD16 824 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 SYTL5Q8TDW5 730 aaPredicted RBP12.77□□□□□ -0.37
CDK3-204ENST00000588812 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 ALG1Q9BT22 464 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 ZMYND12Q9H0C1 365 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 RIC8AQ9NPQ8 531 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 VPS54Q9P1Q0 977 aa12.77□□□□□ -0.37
CDK3-204ENST00000588812 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 B4DLN1 442 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 MEIS2O14770 477 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 ADCY3O60266 1144 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 HOXA13P31271 388 aaPredicted RBP12.76□□□□□ -0.37
CDK3-204ENST00000588812 NLRP5P59047 1200 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 CNTN2Q02246 1040 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 TRIM29Q14134 588 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
CDK3-204ENST00000588812 OLFML2BQ68BL8 750 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 MCTP2Q6DN12 878 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 FBXO46Q6PJ61 603 aaPredicted RBP12.76□□□□□ -0.37
CDK3-204ENST00000588812 MSL3Q8N5Y2 521 aaKnown RBP12.76□□□□□ -0.37
CDK3-204ENST00000588812 SLAIN1Q8ND83 568 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 NPLOC4Q8TAT6 608 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 NSUN6Q8TEA1 469 aaKnown RBP12.76□□□□□ -0.37
CDK3-204ENST00000588812 INTS4Q96HW7 963 aaKnown RBP12.76□□□□□ -0.37
CDK3-204ENST00000588812 MAML3Q96JK9 1138 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 AIFM3Q96NN9 605 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
CDK3-204ENST00000588812 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
CDK3-204ENST00000588812 SOWAHBA6NEL2 793 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 ASB14A6NK59 587 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 DTNBO60941 627 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 FOSP01100 380 aaPredicted RBP12.75□□□□□ -0.37
CDK3-204ENST00000588812 GRK4P32298 578 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 BECN1Q14457 450 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 RMDN3Q96TC7 470 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 ZNFX1Q9P2E3 1918 aaKnown RBP12.75□□□□□ -0.37
CDK3-204ENST00000588812 PTCH2Q9Y6C5 1203 aa12.75□□□□□ -0.37
CDK3-204ENST00000588812 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 HMGCRP04035 888 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
CDK3-204ENST00000588812 GJB2P29033 226 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 AP3B2Q13367 1082 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 CCL14Q16627 93 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 UBE2SQ16763 222 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 ARHGEF16Q5VV41 709 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 MFSD14CQ5VZR4 134 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 MAMDC4Q6UXC1 1216 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 FCHSD1Q86WN1 690 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 REXO1Q8N1G1 1221 aaKnown RBP12.74□□□□□ -0.37
CDK3-204ENST00000588812 DAGLBQ8NCG7 672 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 TRIB2Q92519 343 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
CDK3-204ENST00000588812 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
CDK3-204ENST00000588812 TAAR1Q96RJ0 339 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms