RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
SDF2-207ENST00000588472 NECTIN1Q15223 517 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 KCNA10Q16322 511 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 GNASQ5JWF2 1037 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 SLC39A5Q6ZMH5 540 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 IGDCC4Q8TDY8 1250 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 COL25A1Q9BXS0 654 aaPredicted RBP10.3□□□□□ -0.76
SDF2-207ENST00000588472 UBE2OQ9C0C9 1292 aaKnown RBP10.3□□□□□ -0.76
SDF2-207ENST00000588472 SPC25Q9HBM1 224 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 PRDM5Q9NQX1 630 aaPredicted RBP10.3□□□□□ -0.76
SDF2-207ENST00000588472 ADD3Q9UEY8 706 aaKnown RBP10.3□□□□□ -0.76
SDF2-207ENST00000588472 PNMA2Q9UL42 364 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 ALPK3Q96L96 1907 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 MCM3APO60318 1980 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 ABCB11O95342 1321 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
SDF2-207ENST00000588472 LAMA3Q16787 3333 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 PALM3A6NDB9 673 aaPredicted RBP10.29□□□□□ -0.76
SDF2-207ENST00000588472 MYADML2A6NDP7 307 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 CCDC69A6NI79 296 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 DYNC1LI2O43237 492 aaPredicted RBP10.29□□□□□ -0.76
SDF2-207ENST00000588472 DUSP11O75319 330 aaKnown RBP10.29□□□□□ -0.76
SDF2-207ENST00000588472 RXRAP19793 462 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 ACLYP53396 1101 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
SDF2-207ENST00000588472 BEX3Q00994 111 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 PDE4DQ08499 809 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 GRM4Q14833 912 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 TRIM60Q495X7 471 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 TMEM63BQ5T3F8 832 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 RNF20Q5VTR2 975 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.29□□□□□ -0.76
SDF2-207ENST00000588472 PIGSQ96S52 555 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 KATNBL1Q9H079 304 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 AP5M1Q9H0R1 490 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 LY9Q9HBG7 655 aa10.29□□□□□ -0.76
SDF2-207ENST00000588472 MRPL11Q9Y3B7 192 aaKnown RBP10.29□□□□□ -0.76
SDF2-207ENST00000588472 A0A1W2PQ45 241 aaPredicted RBP10.28□□□□□ -0.76
SDF2-207ENST00000588472 A0A1W2PQY0 241 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
SDF2-207ENST00000588472 PPP1R11O60927 126 aaPredicted RBP10.28□□□□□ -0.76
SDF2-207ENST00000588472 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 CFBP00751 764 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 SMPD1P17405 629 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 TROAPQ12815 778 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 ZNF654Q8IZM8 581 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 CMTR1Q8N1G2 835 aaKnown RBP10.28□□□□□ -0.76
SDF2-207ENST00000588472 CTCFLQ8NI51 663 aaPredicted RBP10.28□□□□□ -0.76
SDF2-207ENST00000588472 TCEANC2Q96MN5 208 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 NEK1Q96PY6 1258 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 TAAR1Q96RJ0 339 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 MPHOSPH6Q99547 160 aaKnown RBP10.28□□□□□ -0.76
SDF2-207ENST00000588472 AMNQ9BXJ7 453 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 PRKAG2Q9UGJ0 569 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 NAP1L2Q9ULW6 460 aaPredicted RBP10.28□□□□□ -0.76
SDF2-207ENST00000588472 PHF24Q9UPV7 400 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 PCDHA1Q9Y5I3 950 aa10.28□□□□□ -0.76
SDF2-207ENST00000588472 LAMA2P24043 3122 aaKnown RBP10.27□□□□□ -0.76
SDF2-207ENST00000588472 SH2B2O14492 632 aaPredicted RBP10.27□□□□□ -0.77
SDF2-207ENST00000588472 ZBTB5O15062 677 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 CYTH3O43739 400 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 ASGR1P07306 291 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 TLE2Q04725 743 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 SLC35G1Q2M3R5 365 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 ARHGEF16Q5VV41 709 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 IQSEC1Q6DN90 963 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 TAPT1Q6NXT6 567 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 TLK2Q86UE8 772 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 MCF2L2Q86YR7 1114 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 RASEFQ8IZ41 740 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 KLHDC9Q8NEP7 349 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 SYTL5Q8TDW5 730 aaPredicted RBP10.27□□□□□ -0.77
SDF2-207ENST00000588472 TMEM87BQ96K49 555 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 RMDN3Q96TC7 470 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 LBHD1Q9BQE6 289 aaPredicted RBP10.27□□□□□ -0.77
SDF2-207ENST00000588472 WDR11Q9BZH6 1224 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 VTA1Q9NP79 307 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 STARD7Q9NQZ5 370 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 COL20A1Q9P218 1284 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 A0A0C4DFX4 3053 aa10.27□□□□□ -0.77
SDF2-207ENST00000588472 hCG_1642624A0A1W2PR95 340 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 B4DLN1 442 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 PLEKHA8P1O95397 391 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 CPA1P15085 419 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 EIF2AK2P19525 551 aaKnown RBP10.26□□□□□ -0.77
SDF2-207ENST00000588472 HOXA13P31271 388 aaPredicted RBP10.26□□□□□ -0.77
SDF2-207ENST00000588472 KIF5BP33176 963 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 MRPL12P52815 198 aaKnown RBP10.26□□□□□ -0.77
SDF2-207ENST00000588472 GJA9P57773 515 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 FGD1P98174 961 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 FSCN1Q16658 493 aaKnown RBP10.26□□□□□ -0.77
SDF2-207ENST00000588472 ADCK5Q3MIX3 580 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 SYNE3Q6ZMZ3 975 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 SH3RF1Q7Z6J0 888 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 FCHSD1Q86WN1 690 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 TMTC2Q8N394 836 aa10.26□□□□□ -0.77
SDF2-207ENST00000588472 PCSK9Q8NBP7 692 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms