RNA–Protein interactions for RNA: ENST00000587379.1

USP36-208, Transcript of ubiquitin specific peptidase 36, human

TSL 3

Gene USP36, Length 606 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP36-208	ENST00000587379	CHST13	Q8NET6	341 aa		11.45	□□□□□ -0.58
USP36-208	ENST00000587379	DCAF4	Q8WV16	495 aa		11.45	□□□□□ -0.58
USP36-208	ENST00000587379	NEK1	Q96PY6	1258 aa		11.45	□□□□□ -0.58
USP36-208	ENST00000587379	ASB2	Q96Q27	587 aa		11.45	□□□□□ -0.58
USP36-208	ENST00000587379	A1CF	Q9NQ94	594 aa	Known RBP	11.45	□□□□□ -0.58
USP36-208	ENST00000587379	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.45	□□□□□ -0.58
USP36-208	ENST00000587379	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.45	□□□□□ -0.58
USP36-208	ENST00000587379	SYNPO2	Q9UMS6	1093 aa		11.45	□□□□□ -0.58
USP36-208	ENST00000587379	TAF6L	Q9Y6J9	622 aa		11.45	□□□□□ -0.58
USP36-208	ENST00000587379	LTBP2	Q14767	1821 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	SYNRG	Q9UMZ2	1314 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	SOWAHB	A6NEL2	793 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	PDHB	P11177	359 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	AKR1A1	P14550	325 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	SMAD3	P84022	425 aa	Known RBP	11.44	□□□□□ -0.58
USP36-208	ENST00000587379	SYDE2	Q5VT97	1194 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	SLC39A5	Q6ZMH5	540 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	ARMCX2	Q7L311	632 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	CCDC144CP	Q8IYA2	1237 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	FBXO40	Q9UH90	709 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	DIS3	Q9Y2L1	958 aa	Known RBP	11.44	□□□□□ -0.58
USP36-208	ENST00000587379	DNAH12	Q6ZR08	3092 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	CACNA1A	O00555	2505 aa		11.44	□□□□□ -0.58
USP36-208	ENST00000587379	ASTN1	O14525	1302 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.43	□□□□□ -0.58
USP36-208	ENST00000587379	NFIB	O00712	420 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	NOV	P48745	357 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	OAZ1	P54368	228 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	MRPS5	P82675	430 aa	Known RBP	11.43	□□□□□ -0.58
USP36-208	ENST00000587379	ACVR2B	Q13705	512 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	IMMT	Q16891	758 aa	Known RBP	11.43	□□□□□ -0.58
USP36-208	ENST00000587379	CCDC144B	Q3MJ40	725 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	PPP4R3B	Q5MIZ7	849 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	TMEM63B	Q5T3F8	832 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	CLEC17A	Q6ZS10	378 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	NOL8	Q76FK4	1167 aa	Known RBP	11.43	□□□□□ -0.58
USP36-208	ENST00000587379	SH3RF1	Q7Z6J0	888 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	ESR2	Q92731	530 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	TNPO1	Q92973	898 aa	Known RBP	11.43	□□□□□ -0.58
USP36-208	ENST00000587379	LRFN3	Q9BTN0	628 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	UBA5	Q9GZZ9	404 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	TTYH1	Q9H313	450 aa	Predicted RBP	11.43	□□□□□ -0.58
USP36-208	ENST00000587379	RNF41	Q9H4P4	317 aa	Predicted RBP	11.43	□□□□□ -0.58
USP36-208	ENST00000587379	THEG	Q9P2T0	379 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	FAM184B	Q9ULE4	1060 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379	CDH23	Q9H251	3354 aa		11.43	□□□□□ -0.58
USP36-208	ENST00000587379		A0A1W2PQ45	241 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379		A0A1W2PQY0	241 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	PTPDC1	A2A3K4	754 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379		E7EWF7	191 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	PQBP1	O60828	265 aa	Known RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379	ADAMTS4	O75173	837 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	C6orf222	P0C671	652 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379	CALML3	P27482	149 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	MCM4	P33991	863 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	BEX3	Q00994	111 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	ZNF543	Q08ER8	600 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	TOB2	Q14106	344 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379	USH1G	Q495M9	461 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	MAMDC4	Q6UXC1	1216 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	SLC30A10	Q6XR72	485 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	STOX1	Q6ZVD7	989 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	DHX32	Q7L7V1	743 aa	Known RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379	RNF180	Q86T96	592 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	FBXO16	Q8IX29	292 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379	FAM133A	Q8N9E0	248 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	RANBP17	Q9H2T7	1088 aa	Known RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379	PDGFC	Q9NRA1	345 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	TCP11L1	Q9NUJ3	509 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	CYP39A1	Q9NYL5	469 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	PRKAG2	Q9UGJ0	569 aa		11.42	□□□□□ -0.58
USP36-208	ENST00000587379	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-208	ENST00000587379	NCOR1	O75376	2440 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	BDP1	A6H8Y1	2624 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	TNKS	O95271	1327 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	ICAM1	P05362	532 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	FDX1	P10109	184 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	EXOSC10	Q01780	885 aa	Known RBP	11.41	□□□□□ -0.58
USP36-208	ENST00000587379	TLE2	Q04725	743 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	BAAT	Q14032	418 aa	Predicted RBP	11.41	□□□□□ -0.58
USP36-208	ENST00000587379	COL9A3	Q14050	684 aa	Predicted RBP	11.41	□□□□□ -0.58
USP36-208	ENST00000587379	FBXL16	Q8N461	479 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	USP38	Q8NB14	1042 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	PNMA1	Q8ND90	353 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	GBP4	Q96PP9	640 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.41	□□□□□ -0.58
USP36-208	ENST00000587379	KATNBL1	Q9H079	304 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	ABHD16B	Q9H3Z7	469 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	KAT14	Q9H8E8	782 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	PDLIM7	Q9NR12	457 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	ZSWIM5	Q9P217	1185 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	NRBP1	Q9UHY1	535 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	PHF24	Q9UPV7	400 aa		11.41	□□□□□ -0.58
USP36-208	ENST00000587379	TRIM43B	A6NCK2	446 aa		11.4	□□□□□ -0.58
USP36-208	ENST00000587379	DHX16	O60231	1041 aa	Known RBP	11.4	□□□□□ -0.58
USP36-208	ENST00000587379	PLA2G6	O60733	806 aa		11.4	□□□□□ -0.58
USP36-208	ENST00000587379	LARGE1	O95461	756 aa		11.4	□□□□□ -0.58
USP36-208	ENST00000587379	ACLY	P53396	1101 aa		11.4	□□□□□ -0.58
USP36-208	ENST00000587379	KCNA10	Q16322	511 aa		11.4	□□□□□ -0.58
USP36-208	ENST00000587379	ME3	Q16798	604 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms