RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 MEIS2O14770 477 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 TMEM266Q2M3C6 531 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 FAM160B2Q86V87 743 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 MTRQ99707 1265 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 CASP1P29466 404 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 TECP42680 631 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 USP11P51784 963 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 USH1GQ495M9 461 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 NAALADL2Q58DX5 795 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 HSD3B7Q9H2F3 369 aa25.15■■□□□ 1.62
CIRBP-208ENST00000586548 DDX25Q9UHL0 483 aaKnown RBP25.15■■□□□ 1.62
CIRBP-208ENST00000586548 SCAF8Q9UPN6 1271 aaKnown RBP25.15■■□□□ 1.62
CIRBP-208ENST00000586548 ASTN2O75129 1339 aaPredicted RBP25.14■■□□□ 1.62
CIRBP-208ENST00000586548 MYL1P05976 194 aa25.14■■□□□ 1.61
CIRBP-208ENST00000586548 ERCC5P28715 1186 aaPredicted RBP25.14■■□□□ 1.61
CIRBP-208ENST00000586548 TXKP42681 527 aa25.14■■□□□ 1.61
CIRBP-208ENST00000586548 RAB34Q9BZG1 259 aa25.14■■□□□ 1.61
CIRBP-208ENST00000586548 DEFB129Q9H1M3 183 aa25.14■■□□□ 1.61
CIRBP-208ENST00000586548 FOSP01100 380 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-208ENST00000586548 LMNB1P20700 586 aa25.13■■□□□ 1.61
CIRBP-208ENST00000586548 MOXD1Q6UVY6 613 aa25.13■■□□□ 1.61
CIRBP-208ENST00000586548 ENOX1Q8TC92 643 aaKnown RBP25.13■■□□□ 1.61
CIRBP-208ENST00000586548 STAMQ92783 540 aa25.13■■□□□ 1.61
CIRBP-208ENST00000586548 RANBP17Q9H2T7 1088 aaKnown RBP25.13■■□□□ 1.61
CIRBP-208ENST00000586548 FEM1BQ9UK73 627 aa25.13■■□□□ 1.61
CIRBP-208ENST00000586548 ZNF500O60304 480 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-208ENST00000586548 CTNND1O60716 968 aaKnown RBP25.12■■□□□ 1.61
CIRBP-208ENST00000586548 CUL4BQ13620 913 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 PDIA5Q14554 519 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 APOBEC3FQ8IUX4 373 aaKnown RBP25.12■■□□□ 1.61
CIRBP-208ENST00000586548 GLIS2Q9BZE0 524 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-208ENST00000586548 RMND1Q9NWS8 449 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 CYP3A7-CYP3A51PA0A087WV96 503 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 PLCG1P19174 1290 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 CYP3A7P24462 503 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 LMOD1P29536 600 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-208ENST00000586548 ZYXQ15942 572 aaKnown RBP25.12■■□□□ 1.61
CIRBP-208ENST00000586548 ARHGAP27Q6ZUM4 889 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 ZNF341Q9BYN7 854 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 BLZF1Q9H2G9 400 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 TTC12Q9H892 705 aaPredicted RBP25.12■■□□□ 1.61
CIRBP-208ENST00000586548 KBTBD4Q9NVX7 518 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 LRWD1Q9UFC0 647 aa25.12■■□□□ 1.61
CIRBP-208ENST00000586548 PIK3CDO00329 1044 aa25.11■■□□□ 1.61
CIRBP-208ENST00000586548 DCAF15Q66K64 600 aa25.11■■□□□ 1.61
CIRBP-208ENST00000586548 GPC2Q8N158 579 aa25.11■■□□□ 1.61
CIRBP-208ENST00000586548 CRYGNQ8WXF5 182 aa25.11■■□□□ 1.61
CIRBP-208ENST00000586548 CALML4Q96GE6 196 aa25.11■■□□□ 1.61
CIRBP-208ENST00000586548 MBOAT7Q96N66 472 aa25.11■■□□□ 1.61
CIRBP-208ENST00000586548 FEZ1Q99689 392 aa25.11■■□□□ 1.61
CIRBP-208ENST00000586548 MMTAG2Q9BU76 263 aaKnown RBP25.11■■□□□ 1.61
CIRBP-208ENST00000586548 OPLAHO14841 1288 aa25.1■■□□□ 1.61
CIRBP-208ENST00000586548 FMR1Q06787 632 aaKnown RBP eCLIP25.1■■□□□ 1.61
CIRBP-208ENST00000586548 SEMA3FQ13275 785 aa25.1■■□□□ 1.61
CIRBP-208ENST00000586548 CCDC84Q86UT8 332 aaPredicted RBP25.1■■□□□ 1.61
CIRBP-208ENST00000586548 KIFC2Q96AC6 838 aa25.1■■□□□ 1.61
CIRBP-208ENST00000586548 HOOK2Q96ED9 719 aa25.1■■□□□ 1.61
CIRBP-208ENST00000586548 ZNF830Q96NB3 372 aaPredicted RBP25.1■■□□□ 1.61
CIRBP-208ENST00000586548 GPRC5DQ9NZD1 345 aa25.1■■□□□ 1.61
CIRBP-208ENST00000586548 SBF1O95248 1867 aa25.1■■□□□ 1.61
CIRBP-208ENST00000586548 DOCK1Q14185 1865 aa25.1■■□□□ 1.61
CIRBP-208ENST00000586548 SPDYE3A6NKU9 549 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 RPN1P04843 607 aaKnown RBP25.09■■□□□ 1.61
CIRBP-208ENST00000586548 FANCCQ00597 558 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 CCDC186Q7Z3E2 898 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 LPAR1Q92633 364 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 HAS1Q92839 578 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 FANCLQ9NW38 375 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 IFNKQ9P0W0 207 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 PTGS1P23219 599 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 SREBF1P36956 1147 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 ARHGAP4P98171 946 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 P2RX7Q99572 595 aaKnown RBP25.09■■□□□ 1.61
CIRBP-208ENST00000586548 XPO4Q9C0E2 1151 aaKnown RBP25.09■■□□□ 1.61
CIRBP-208ENST00000586548 KIAA1683Q9H0B3 1180 aa25.09■■□□□ 1.61
CIRBP-208ENST00000586548 WDR46O15213 610 aaKnown RBP25.08■■□□□ 1.61
CIRBP-208ENST00000586548 NBPF12Q5TAG4 269 aaPredicted RBP25.08■■□□□ 1.61
CIRBP-208ENST00000586548 LRRC15Q8TF66 581 aa25.08■■□□□ 1.61
CIRBP-208ENST00000586548 PLIN2Q99541 437 aa25.08■■□□□ 1.61
CIRBP-208ENST00000586548 KCNF1Q9H3M0 494 aa25.08■■□□□ 1.61
CIRBP-208ENST00000586548 NRBP1Q9UHY1 535 aa25.08■■□□□ 1.61
CIRBP-208ENST00000586548 CBFA2T2O43439 604 aa25.07■■□□□ 1.6
CIRBP-208ENST00000586548 ATP1A3P13637 1013 aa25.07■■□□□ 1.6
CIRBP-208ENST00000586548 CD44P16070 742 aaKnown RBP25.07■■□□□ 1.6
CIRBP-208ENST00000586548 KCNB1Q14721 858 aa25.07■■□□□ 1.6
CIRBP-208ENST00000586548 ZNF658Q5TYW1 1059 aaPredicted RBP25.07■■□□□ 1.6
CIRBP-208ENST00000586548 ANGEL2Q5VTE6 544 aaKnown RBP25.07■■□□□ 1.6
CIRBP-208ENST00000586548 TRPM4Q8TD43 1214 aa25.07■■□□□ 1.6
CIRBP-208ENST00000586548 KCNMB3Q9NPA1 279 aa25.07■■□□□ 1.6
CIRBP-208ENST00000586548 STK17AQ9UEE5 414 aa25.07■■□□□ 1.6
CIRBP-208ENST00000586548 NFE2L3Q9Y4A8 694 aa25.07■■□□□ 1.6
CIRBP-208ENST00000586548 PPP1R3GB7ZBB8 358 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 MARCH6O60337 910 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 TAL1P17542 331 aaPredicted RBP25.06■■□□□ 1.6
CIRBP-208ENST00000586548 CCDC174Q6PII3 467 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 FHDC1Q9C0D6 1143 aaPredicted RBP25.06■■□□□ 1.6
CIRBP-208ENST00000586548 ZNF112Q9UJU3 913 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 MRPL11Q9Y3B7 192 aaKnown RBP25.06■■□□□ 1.6
CIRBP-208ENST00000586548 SYNRGQ9UMZ2 1314 aa25.06■■□□□ 1.6
CIRBP-208ENST00000586548 ZNF18P17022 549 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms