RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 UPF3AQ9H1J1 476 aaKnown RBP21.8■■□□□ 1.08
ATG4D-203ENST00000585752 VAT1LQ9HCJ6 419 aa21.8■■□□□ 1.08
ATG4D-203ENST00000585752 A0A0U1RQG5 324 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-203ENST00000585752 MYADML2A6NDP7 307 aa21.79■■□□□ 1.08
ATG4D-203ENST00000585752 CDC37Q16543 378 aaPredicted RBP21.79■■□□□ 1.08
ATG4D-203ENST00000585752 GPR153Q6NV75 609 aa21.79■■□□□ 1.08
ATG4D-203ENST00000585752 KATNBL1Q9H079 304 aa21.79■■□□□ 1.08
ATG4D-203ENST00000585752 ABCB11O95342 1321 aa21.79■■□□□ 1.08
ATG4D-203ENST00000585752 LRRC37A2A6NM11 1700 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-203ENST00000585752 CABYRO75952 493 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 BEX3Q00994 111 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 BRDTQ58F21 947 aaPredicted RBP21.78■■□□□ 1.08
ATG4D-203ENST00000585752 SH3RF1Q7Z6J0 888 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 MCF2L2Q86YR7 1114 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 ADGRF4Q8IZF3 695 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 NCOA7Q8NI08 942 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 PURBQ96QR8 312 aaKnown RBP21.78■■□□□ 1.08
ATG4D-203ENST00000585752 CPVLQ9H3G5 476 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 Q9Y3F1 56 aa21.78■■□□□ 1.08
ATG4D-203ENST00000585752 TRIM43BA6NCK2 446 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 IFIT3O14879 490 aaKnown RBP21.77■■□□□ 1.08
ATG4D-203ENST00000585752 SLC27A2O14975 620 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 ADCY6O43306 1168 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 SMPD1P17405 629 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 RPS6P62753 249 aaKnown RBP21.77■■□□□ 1.08
ATG4D-203ENST00000585752 FSCN1Q16658 493 aaKnown RBP21.77■■□□□ 1.08
ATG4D-203ENST00000585752 CREB3L3Q68CJ9 461 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 CCSAPQ6IQ19 270 aaPredicted RBP21.77■■□□□ 1.08
ATG4D-203ENST00000585752 SLC30A10Q6XR72 485 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 ANKRD33Q7Z3H0 272 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 DNERQ8NFT8 737 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 TRIM43Q96BQ3 446 aaPredicted RBP21.77■■□□□ 1.08
ATG4D-203ENST00000585752 PDGFCQ9NRA1 345 aa21.77■■□□□ 1.08
ATG4D-203ENST00000585752 MRPL11Q9Y3B7 192 aaKnown RBP21.77■■□□□ 1.08
ATG4D-203ENST00000585752 E7EWF7 191 aa21.76■■□□□ 1.07
ATG4D-203ENST00000585752 ARVCFO00192 962 aa21.76■■□□□ 1.07
ATG4D-203ENST00000585752 TAPT1Q6NXT6 567 aa21.76■■□□□ 1.07
ATG4D-203ENST00000585752 FBXO11Q86XK2 927 aa21.76■■□□□ 1.07
ATG4D-203ENST00000585752 CLEC4DQ8WXI8 215 aa21.76■■□□□ 1.07
ATG4D-203ENST00000585752 WDR11Q9BZH6 1224 aa21.76■■□□□ 1.07
ATG4D-203ENST00000585752 MAF1Q9H063 256 aa21.76■■□□□ 1.07
ATG4D-203ENST00000585752 GPHNQ9NQX3 736 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-203ENST00000585752 GNEQ9Y223 722 aaKnown RBP21.76■■□□□ 1.07
ATG4D-203ENST00000585752 KIAA0355O15063 1070 aa21.75■■□□□ 1.07
ATG4D-203ENST00000585752 IRX5P78411 483 aaPredicted RBP21.75■■□□□ 1.07
ATG4D-203ENST00000585752 WTAPQ15007 396 aa21.75■■□□□ 1.07
ATG4D-203ENST00000585752 DEFB123Q8N688 67 aa21.75■■□□□ 1.07
ATG4D-203ENST00000585752 RGS22Q8NE09 1264 aa21.75■■□□□ 1.07
ATG4D-203ENST00000585752 MORC4Q8TE76 937 aa21.75■■□□□ 1.07
ATG4D-203ENST00000585752 DDX49Q9Y6V7 483 aaKnown RBP21.75■■□□□ 1.07
ATG4D-203ENST00000585752 ASTN1O14525 1302 aa21.75■■□□□ 1.07
ATG4D-203ENST00000585752 KLRF2D3W0D1 207 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 FPGSQ05932 587 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 FAAP100Q0VG06 881 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 TRAF1Q13077 416 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 NECTIN1Q15223 517 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 QRICH1Q2TAL8 776 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 DUSP28Q4G0W2 176 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 CYB5R4Q7L1T6 521 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 SEZ6LQ9BYH1 1024 aa21.74■■□□□ 1.07
ATG4D-203ENST00000585752 CPT1AP50416 773 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 NKX3-2P78367 333 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 KRT32Q14532 448 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 PPP2R5BQ15173 497 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 SHHQ15465 462 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 CXCL17Q6UXB2 119 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 OR6J1Q8NGC5 347 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 AMNQ9BXJ7 453 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 POLR3EQ9NVU0 708 aa21.73■■□□□ 1.07
ATG4D-203ENST00000585752 NKRFO15226 690 aaKnown RBP eCLIP21.72■■□□□ 1.07
ATG4D-203ENST00000585752 TIMP1P01033 207 aa21.72■■□□□ 1.07
ATG4D-203ENST00000585752 SEC23AQ15436 765 aa21.72■■□□□ 1.07
ATG4D-203ENST00000585752 CATIPQ7Z7H3 387 aa21.72■■□□□ 1.07
ATG4D-203ENST00000585752 SCFD2Q8WU76 684 aa21.72■■□□□ 1.07
ATG4D-203ENST00000585752 JMJD4Q9H9V9 463 aa21.72■■□□□ 1.07
ATG4D-203ENST00000585752 CDK7P50613 346 aa21.71■■□□□ 1.07
ATG4D-203ENST00000585752 ITGA7Q13683 1181 aa21.71■■□□□ 1.07
ATG4D-203ENST00000585752 TTLL4Q14679 1199 aa21.71■■□□□ 1.07
ATG4D-203ENST00000585752 TMEM67Q5HYA8 995 aa21.71■■□□□ 1.07
ATG4D-203ENST00000585752 ARHGEF16Q5VV41 709 aa21.71■■□□□ 1.07
ATG4D-203ENST00000585752 TMEM199Q8N511 208 aa21.71■■□□□ 1.07
ATG4D-203ENST00000585752 NSUN6Q8TEA1 469 aaKnown RBP21.71■■□□□ 1.07
ATG4D-203ENST00000585752 RNPC3Q96LT9 517 aaKnown RBP21.71■■□□□ 1.07
ATG4D-203ENST00000585752 KIAA1217Q5T5P2 1943 aa21.7■■□□□ 1.07
ATG4D-203ENST00000585752 EPB41L2O43491 1005 aaKnown RBP21.7■■□□□ 1.06
ATG4D-203ENST00000585752 CFBP00751 764 aa21.7■■□□□ 1.06
ATG4D-203ENST00000585752 MYL3P08590 195 aa21.7■■□□□ 1.06
ATG4D-203ENST00000585752 TXNP10599 105 aaKnown RBP21.7■■□□□ 1.06
ATG4D-203ENST00000585752 MCM5P33992 734 aa21.7■■□□□ 1.06
ATG4D-203ENST00000585752 STOX1Q6ZVD7 989 aa21.7■■□□□ 1.06
ATG4D-203ENST00000585752 HOMER1Q86YM7 354 aa21.7■■□□□ 1.06
ATG4D-203ENST00000585752 STAG2Q8N3U4 1231 aa21.7■■□□□ 1.06
ATG4D-203ENST00000585752 CTAGE5O15320 804 aa21.69■■□□□ 1.06
ATG4D-203ENST00000585752 PPIGQ13427 754 aaKnown RBP eCLIP21.69■■□□□ 1.062e-6■■□□□ 14.2
ATG4D-203ENST00000585752 STXBP2Q15833 593 aa21.69■■□□□ 1.06
ATG4D-203ENST00000585752 C9orf50Q5SZB4 431 aa21.69■■□□□ 1.06
ATG4D-203ENST00000585752 ZNF697Q5TEC3 545 aa21.69■■□□□ 1.06
ATG4D-203ENST00000585752 Q7L0L9 218 aa21.69■■□□□ 1.06
ATG4D-203ENST00000585752 CHST3Q7LGC8 479 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms