RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 ACAD9Q9H845 621 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 FBXO40Q9UH90 709 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 HMGCRP04035 888 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 SMARCA1P28370 1054 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 TKFCQ3LXA3 575 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 HOMER1Q86YM7 354 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 ANKRD35Q8N283 1001 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 AIFM3Q96NN9 605 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 RIOX1Q9H6W3 641 aa19.25■□□□□ 0.67
GCDH-203ENST00000585420 RBM27Q9P2N5 1060 aaKnown RBP19.25■□□□□ 0.67
GCDH-203ENST00000585420 SMCHD1A6NHR9 2005 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 ZNF236Q9UL36 1845 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 STX6O43752 255 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 UBXN2AP68543 259 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 PKP1Q13835 747 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 QRICH1Q2TAL8 776 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 USH1GQ495M9 461 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.24■□□□□ 0.67
GCDH-203ENST00000585420 MTMR8Q96EF0 704 aa19.24■□□□□ 0.67
GCDH-203ENST00000585420 RRP36Q96EU6 259 aaKnown RBP19.24■□□□□ 0.67
GCDH-203ENST00000585420 SEC63Q9UGP8 760 aaKnown RBP19.24■□□□□ 0.67
GCDH-203ENST00000585420 VPS37CA5D8V6 355 aaPredicted RBP19.23■□□□□ 0.67
GCDH-203ENST00000585420 H3BQV1 296 aa19.23■□□□□ 0.67
GCDH-203ENST00000585420 NUCB2P80303 420 aa19.23■□□□□ 0.67
GCDH-203ENST00000585420 ZNF792Q3KQV3 632 aa19.23■□□□□ 0.67
GCDH-203ENST00000585420 IFFO2Q5TF58 517 aa19.23■□□□□ 0.67
GCDH-203ENST00000585420 C8orf76Q96K31 380 aa19.23■□□□□ 0.67
GCDH-203ENST00000585420 A1CFQ9NQ94 594 aaKnown RBP19.23■□□□□ 0.67
GCDH-203ENST00000585420 DNAJC25-GNG10A0A024R161 153 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 NFIBO00712 420 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 IGHA2P01877 340 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 SOX10P56693 466 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 PKN1Q16512 942 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 TRMT44Q8IYL2 757 aaKnown RBP19.22■□□□□ 0.67
GCDH-203ENST00000585420 CLEC4DQ8WXI8 215 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 MAML3Q96JK9 1138 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 PIGSQ96S52 555 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 SLC5A4Q9NY91 659 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 ZNFX1Q9P2E3 1918 aaKnown RBP19.22■□□□□ 0.67
GCDH-203ENST00000585420 ZBTB5O15062 677 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 CCL5P13501 91 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 SCG2P13521 617 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 CYP2C19P33261 490 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 CACNB2Q08289 660 aaPredicted RBP19.22■□□□□ 0.67
GCDH-203ENST00000585420 TRIM29Q14134 588 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 PFKFB3Q16875 520 aaPredicted RBP19.22■□□□□ 0.67
GCDH-203ENST00000585420 UNC93B1Q9H1C4 597 aa19.22■□□□□ 0.67
GCDH-203ENST00000585420 POTEFA5A3E0 1075 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 PPP1R11O60927 126 aaPredicted RBP19.21■□□□□ 0.67
GCDH-203ENST00000585420 PDIA4P13667 645 aaKnown RBP19.21■□□□□ 0.67
GCDH-203ENST00000585420 PRKAR2AP13861 404 aaKnown RBP19.21■□□□□ 0.67
GCDH-203ENST00000585420 GUCY1B3Q02153 619 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 MAP3K21Q5TCX8 1036 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 FOXD4L5Q5VV16 416 aaPredicted RBP19.21■□□□□ 0.67
GCDH-203ENST00000585420 OLFML2BQ68BL8 750 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 NSMFQ6X4W1 530 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 FBXO11Q86XK2 927 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 FOXD4L4Q8WXT5 416 aaPredicted RBP19.21■□□□□ 0.67
GCDH-203ENST00000585420 RNF208Q9H0X6 261 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 GJB4Q9NTQ9 266 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 PNMA2Q9UL42 364 aa19.21■□□□□ 0.67
GCDH-203ENST00000585420 DIS3Q9Y2L1 958 aaKnown RBP19.21■□□□□ 0.67
GCDH-203ENST00000585420 XBP1P17861 261 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 CNTN2Q02246 1040 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 HEATR3Q7Z4Q2 680 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 CYP39A1Q9NYL5 469 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 GPKOWQ92917 476 aaPredicted RBP eCLIP19.2■□□□□ 0.66
GCDH-203ENST00000585420 FGD4Q96M96 766 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 PURBQ96QR8 312 aaKnown RBP19.2■□□□□ 0.66
GCDH-203ENST00000585420 TMEM106CQ9BVX2 250 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 AMNQ9BXJ7 453 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 VPS54Q9P1Q0 977 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 MTMR6Q9Y217 621 aa19.2■□□□□ 0.66
GCDH-203ENST00000585420 BAZ2BQ9UIF8 2168 aaKnown RBP19.19■□□□□ 0.66
GCDH-203ENST00000585420 PFASO15067 1338 aa19.19■□□□□ 0.66
GCDH-203ENST00000585420 RPTORQ8N122 1335 aa19.19■□□□□ 0.66
GCDH-203ENST00000585420 BRD1O95696 1058 aa19.19■□□□□ 0.66
GCDH-203ENST00000585420 MFSD14CQ5VZR4 134 aa19.19■□□□□ 0.66
GCDH-203ENST00000585420 FAM133AQ8N9E0 248 aa19.19■□□□□ 0.66
GCDH-203ENST00000585420 FBXO18Q8NFZ0 1043 aa19.19■□□□□ 0.66
GCDH-203ENST00000585420 TINF2Q9BSI4 451 aa19.19■□□□□ 0.66
GCDH-203ENST00000585420 ABCB11O95342 1321 aa19.18■□□□□ 0.66
GCDH-203ENST00000585420 PNMA6FA0A0J9YX94 578 aa19.18■□□□□ 0.66
GCDH-203ENST00000585420 POTEB2H3BUK9 544 aa19.18■□□□□ 0.66
GCDH-203ENST00000585420 ZSCAN22P10073 491 aaPredicted RBP19.18■□□□□ 0.66
GCDH-203ENST00000585420 CCND3P30281 292 aaPredicted RBP19.18■□□□□ 0.66
GCDH-203ENST00000585420 BAATQ14032 418 aaPredicted RBP19.18■□□□□ 0.66
GCDH-203ENST00000585420 KRT40Q6A162 431 aa19.18■□□□□ 0.66
GCDH-203ENST00000585420 WWC2Q6AWC2 1192 aa19.18■□□□□ 0.66
GCDH-203ENST00000585420 TBC1D5Q92609 795 aa19.18■□□□□ 0.66
GCDH-203ENST00000585420 HMX1Q9NP08 348 aaPredicted RBP19.18■□□□□ 0.66
GCDH-203ENST00000585420 PAK6Q9NQU5 681 aaPredicted RBP19.18■□□□□ 0.66
GCDH-203ENST00000585420 ZDHHC9Q9Y397 364 aa19.18■□□□□ 0.66
GCDH-203ENST00000585420 SOWAHBA6NEL2 793 aa19.17■□□□□ 0.66
GCDH-203ENST00000585420 PRAMEF19Q5SWL8 479 aa19.17■□□□□ 0.66
GCDH-203ENST00000585420 SLC30A10Q6XR72 485 aa19.17■□□□□ 0.66
GCDH-203ENST00000585420 KCNJ14Q9UNX9 436 aa19.17■□□□□ 0.66
GCDH-203ENST00000585420 PCDHA1Q9Y5I3 950 aa19.17■□□□□ 0.66
GCDH-203ENST00000585420 ASTN1O14525 1302 aa19.17■□□□□ 0.66
GCDH-203ENST00000585420 EN2P19622 333 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms