RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 KIAA1211Q6ZU35 1233 aa21.58■■□□□ 1.05
TOP3A-220ENST00000585031 TMCO2Q7Z6W1 182 aaPredicted RBP21.58■■□□□ 1.05
TOP3A-220ENST00000585031 HERC6Q8IVU3 1022 aa21.58■■□□□ 1.05
TOP3A-220ENST00000585031 OSBP2Q969R2 916 aa21.58■■□□□ 1.05
TOP3A-220ENST00000585031 CYP39A1Q9NYL5 469 aa21.58■■□□□ 1.05
TOP3A-220ENST00000585031 LMCD1Q9NZU5 365 aa21.58■■□□□ 1.05
TOP3A-220ENST00000585031 ALAS1P13196 640 aa21.57■■□□□ 1.04
TOP3A-220ENST00000585031 FAM178BQ8IXR5 827 aa21.57■■□□□ 1.04
TOP3A-220ENST00000585031 RPAP2Q8IXW5 612 aaPredicted RBP21.57■■□□□ 1.04
TOP3A-220ENST00000585031 MORC4Q8TE76 937 aa21.57■■□□□ 1.04
TOP3A-220ENST00000585031 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.56■■□□□ 1.04
TOP3A-220ENST00000585031 TTLL1O95922 423 aa21.56■■□□□ 1.04
TOP3A-220ENST00000585031 IQCF3P0C7M6 154 aa21.56■■□□□ 1.04
TOP3A-220ENST00000585031 SUPT20HL2P0C7V6 817 aa21.56■■□□□ 1.04
TOP3A-220ENST00000585031 GPNMBQ14956 572 aa21.56■■□□□ 1.04
TOP3A-220ENST00000585031 NBPF20Q3BBV1 942 aa21.56■■□□□ 1.04
TOP3A-220ENST00000585031 DUSP28Q4G0W2 176 aa21.56■■□□□ 1.04
TOP3A-220ENST00000585031 GJD3Q8N144 294 aa21.56■■□□□ 1.04
TOP3A-220ENST00000585031 KIF28PB7ZC32 967 aa21.55■■□□□ 1.04
TOP3A-220ENST00000585031 MYL3P08590 195 aa21.55■■□□□ 1.04
TOP3A-220ENST00000585031 ACTN1P12814 892 aa21.55■■□□□ 1.04
TOP3A-220ENST00000585031 NHLH1Q02575 133 aa21.55■■□□□ 1.04
TOP3A-220ENST00000585031 GIMAP6Q6P9H5 292 aa21.55■■□□□ 1.04
TOP3A-220ENST00000585031 ZNF444Q8N0Y2 327 aaPredicted RBP21.55■■□□□ 1.04
TOP3A-220ENST00000585031 STAG1Q8WVM7 1258 aa21.55■■□□□ 1.04
TOP3A-220ENST00000585031 C5orf42Q9H799 3197 aa21.55■■□□□ 1.04
TOP3A-220ENST00000585031 FDX1P10109 184 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 MCCP23508 829 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 RFC2P35250 354 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 STAT2P52630 851 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 TKFCQ3LXA3 575 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 KCTD1Q719H9 257 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 NEDD1Q8NHV4 660 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 GDPD5Q8WTR4 605 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 VTA1Q9NP79 307 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 SYNPO2Q9UMS6 1093 aa21.54■■□□□ 1.04
TOP3A-220ENST00000585031 PLIN4Q96Q06 1357 aa21.53■■□□□ 1.04
TOP3A-220ENST00000585031 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
TOP3A-220ENST00000585031 TCTN1Q2MV58 587 aa21.53■■□□□ 1.04
TOP3A-220ENST00000585031 ZSCAN25Q6NSZ9 544 aa21.53■■□□□ 1.04
TOP3A-220ENST00000585031 WDR11Q9BZH6 1224 aa21.53■■□□□ 1.04
TOP3A-220ENST00000585031 KCNH6Q9H252 994 aa21.53■■□□□ 1.04
TOP3A-220ENST00000585031 ISY1Q9ULR0 285 aaKnown RBP21.53■■□□□ 1.04
TOP3A-220ENST00000585031 M0R2C6 588 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 SMARCA5O60264 1052 aaPredicted RBP21.52■■□□□ 1.04
TOP3A-220ENST00000585031 ALADP13716 330 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 LEXMQ3ZCV2 418 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 NSMFQ6X4W1 530 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.52■■□□□ 1.04
TOP3A-220ENST00000585031 CHURC1Q8WUH1 139 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 GMCL1Q96IK5 515 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 CTAGE1Q96RT6 745 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 FTOQ9C0B1 505 aaKnown RBP eCLIP21.52■■□□□ 1.04
TOP3A-220ENST00000585031 POLR3EQ9NVU0 708 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 PRR12Q9ULL5 1215 aa21.52■■□□□ 1.04
TOP3A-220ENST00000585031 RBM47A0AV96 593 aaKnown RBP21.51■■□□□ 1.03
TOP3A-220ENST00000585031 FAM47CQ5HY64 1035 aa21.51■■□□□ 1.03
TOP3A-220ENST00000585031 FAM160B2Q86V87 743 aa21.51■■□□□ 1.03
TOP3A-220ENST00000585031 COPS5Q92905 334 aa21.51■■□□□ 1.03
TOP3A-220ENST00000585031 FBXL18Q96ME1 805 aa21.51■■□□□ 1.03
TOP3A-220ENST00000585031 MTG1Q9BT17 334 aaPredicted RBP21.51■■□□□ 1.03
TOP3A-220ENST00000585031 UBE2ZQ9H832 354 aaPredicted RBP21.51■■□□□ 1.03
TOP3A-220ENST00000585031 SIP14410 1827 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 POTEB3A0JP26 581 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 PITPNM1O00562 1244 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 GPAA1O43292 621 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 PLA2G6O60733 806 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 SLC1A4P43007 532 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 DEFB103AP81534 67 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 TFAP4Q01664 338 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 IKQ13123 557 aaPredicted RBP21.5■■□□□ 1.03
TOP3A-220ENST00000585031 BAATQ14032 418 aaPredicted RBP21.5■■□□□ 1.03
TOP3A-220ENST00000585031 POTEBQ6S5H4 581 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 SUGCTQ9HAC7 445 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 INCENPQ9NQS7 918 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 ZBTB40Q9NUA8 1239 aa21.5■■□□□ 1.03
TOP3A-220ENST00000585031 ALDH5A1P51649 535 aaPredicted RBP21.49■■□□□ 1.03
TOP3A-220ENST00000585031 WDR5P61964 334 aaKnown RBP21.49■■□□□ 1.03
TOP3A-220ENST00000585031 IFNL3Q8IZI9 196 aa21.49■■□□□ 1.03
TOP3A-220ENST00000585031 OR6J1Q8NGC5 347 aa21.49■■□□□ 1.03
TOP3A-220ENST00000585031 APPBP2Q92624 585 aa21.49■■□□□ 1.03
TOP3A-220ENST00000585031 UIMC1Q96RL1 719 aa21.49■■□□□ 1.03
TOP3A-220ENST00000585031 IL17RBQ9NRM6 502 aa21.49■■□□□ 1.03
TOP3A-220ENST00000585031 NFIBO00712 420 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 NMT2O60551 498 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 BAIAP3O94812 1187 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 TSPY3P0CV98 308 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 TSPY8P0CW00 308 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 TDO2P48775 406 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 RCSD1Q6JBY9 416 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 NFRKBQ6P4R8 1299 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 KBTBD3Q8NAB2 608 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 RETREG2Q8NC44 543 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 MTUS1Q9ULD2 1270 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 CCPG1Q9ULG6 757 aa21.48■■□□□ 1.03
TOP3A-220ENST00000585031 RNF113AO15541 343 aaKnown RBP21.47■■□□□ 1.03
TOP3A-220ENST00000585031 HMMRO75330 724 aa21.47■■□□□ 1.03
TOP3A-220ENST00000585031 IL9P15248 144 aa21.47■■□□□ 1.03
TOP3A-220ENST00000585031 CPT1AP50416 773 aa21.47■■□□□ 1.03
TOP3A-220ENST00000585031 TSHZ3Q63HK5 1081 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms