RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 MCF2L2Q86YR7 1114 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 SMARCC2Q8TAQ2 1214 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 SH3TC2Q8TF17 1288 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 SOCS4Q8WXH5 440 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 CUL5Q93034 780 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 MTMR8Q96EF0 704 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 TMX3Q96JJ7 454 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 A1CFQ9NQ94 594 aaKnown RBP9.62□□□□□ -0.87
ERBB2-216ENST00000584014 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
ERBB2-216ENST00000584014 ORC3Q9UBD5 711 aaPredicted RBP9.62□□□□□ -0.87
ERBB2-216ENST00000584014 SSUH2Q9Y2M2 353 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 PTPN22Q9Y2R2 807 aa9.62□□□□□ -0.87
ERBB2-216ENST00000584014 SMCO2A6NFE2 343 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 GCOM1H8Y6P7 765 aaPredicted RBP9.61□□□□□ -0.87
ERBB2-216ENST00000584014 COBLO75128 1261 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 POLR2MP0CAP2 368 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 SCG2P13521 617 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 IFNAR1P17181 557 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 CNGA1P29973 690 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 MCM2P49736 904 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 NLRP5P59047 1200 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 RPS6P62753 249 aaKnown RBP9.61□□□□□ -0.87
ERBB2-216ENST00000584014 UBXN2AP68543 259 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 FUT2Q10981 343 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 NTRK3Q16288 839 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 UBE2SQ16763 222 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 SLC9C1Q4G0N8 1177 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 MORN1Q5T089 497 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 HSCBQ8IWL3 235 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 FAM184AQ8NB25 1140 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 NPLOC4Q8TAT6 608 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 CLEC4DQ8WXI8 215 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 AIFM3Q96NN9 605 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 RNF26Q9BY78 433 aaPredicted RBP9.61□□□□□ -0.87
ERBB2-216ENST00000584014 MCOLN1Q9GZU1 580 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 PSTPIP2Q9H939 334 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 VPS54Q9P1Q0 977 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 GJD2Q9UKL4 321 aa9.61□□□□□ -0.87
ERBB2-216ENST00000584014 DDX49Q9Y6V7 483 aaKnown RBP9.61□□□□□ -0.87
ERBB2-216ENST00000584014 PFASO15067 1338 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 PLXNA1Q9UIW2 1896 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 STXBP3O00186 592 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 DEXIO95424 95 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 CTDNEP1O95476 244 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 MYCLP12524 364 aaPredicted RBP9.6□□□□□ -0.87
ERBB2-216ENST00000584014 GRK4P32298 578 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 CYP2C19P33261 490 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 GUCY1B3Q02153 619 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 TRIM29Q14134 588 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 GRB14Q14449 540 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 PFKFB3Q16875 520 aaPredicted RBP9.6□□□□□ -0.87
ERBB2-216ENST00000584014 ARHGEF16Q5VV41 709 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 FBXO46Q6PJ61 603 aaPredicted RBP9.6□□□□□ -0.87
ERBB2-216ENST00000584014 USP17L6PQ6QN14 398 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 EEPD1Q7L9B9 569 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 NSUN7Q8NE18 718 aaKnown RBP9.6□□□□□ -0.87
ERBB2-216ENST00000584014 ZFP91Q96JP5 570 aaPredicted RBP9.6□□□□□ -0.87
ERBB2-216ENST00000584014 TAAR1Q96RJ0 339 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 APBA2Q99767 749 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 ALG1Q9BT22 464 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 GJB4Q9NTQ9 266 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 CYP39A1Q9NYL5 469 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 RBM27Q9P2N5 1060 aaKnown RBP9.6□□□□□ -0.87
ERBB2-216ENST00000584014 KCNJ14Q9UNX9 436 aa9.6□□□□□ -0.87
ERBB2-216ENST00000584014 SOWAHBA6NEL2 793 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 XBP1P17861 261 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 EIF2AK2P19525 551 aaKnown RBP9.59□□□□□ -0.87
ERBB2-216ENST00000584014 ADCY7P51828 1080 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 MRPL12P52815 198 aaKnown RBP9.59□□□□□ -0.87
ERBB2-216ENST00000584014 PRMT2P55345 433 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 TRIM32Q13049 653 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 PKN1Q16512 942 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 PKN2Q16513 984 aaKnown RBP9.59□□□□□ -0.87
ERBB2-216ENST00000584014 PRAMEF19Q5SWL8 479 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 MFSD14CQ5VZR4 134 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 ABRAQ8N0Z2 381 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 CCDC12Q8WUD4 166 aaPredicted RBP9.59□□□□□ -0.87
ERBB2-216ENST00000584014 WASF1Q92558 559 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 MAML3Q96JK9 1138 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 PGBD1Q96JS3 809 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 RMDN3Q96TC7 470 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 TMEM260Q9NX78 707 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 BARHL2Q9NY43 387 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 FLRT1Q9NZU1 646 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 ADD3Q9UEY8 706 aaKnown RBP9.59□□□□□ -0.87
ERBB2-216ENST00000584014 SMC3Q9UQE7 1217 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 NID2Q14112 1375 aa9.59□□□□□ -0.87
ERBB2-216ENST00000584014 RBBP6Q7Z6E9 1792 aaKnown RBP9.58□□□□□ -0.88
ERBB2-216ENST00000584014 SPDYE3A6NKU9 549 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 K7ELQ4 463 aaPredicted RBP9.58□□□□□ -0.88
ERBB2-216ENST00000584014 HAX1O00165 279 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 INHAP05111 366 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 PDE4DQ08499 809 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 ST3GAL1Q11201 340 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 GNL2Q13823 731 aaKnown RBP9.58□□□□□ -0.88
ERBB2-216ENST00000584014 ZNF792Q3KQV3 632 aa9.58□□□□□ -0.88
ERBB2-216ENST00000584014 ANO1Q5XXA6 986 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms