RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 MTMR6Q9Y217 621 aa12.58□□□□□ -0.4
TOP3A-216ENST00000583804 GCOM1H8Y6P7 765 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-216ENST00000583804 POLR2MP0CAP2 368 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 HSPA1AP0DMV8 641 aaKnown RBP12.57□□□□□ -0.4
TOP3A-216ENST00000583804 HSPA1BP0DMV9 641 aaKnown RBP12.57□□□□□ -0.4
TOP3A-216ENST00000583804 CALML3P27482 149 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 GNA11P29992 359 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 ADCY7P51828 1080 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 BAATQ14032 418 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-216ENST00000583804 RNF207Q6ZRF8 634 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 CUL5Q93034 780 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 SHISA4Q96DD7 197 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
TOP3A-216ENST00000583804 OPLAHO14841 1288 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 FOXN1O15353 648 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 STRNO43815 780 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 PTPREP23469 700 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 CTGFP29279 349 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 HOXA13P31271 388 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-216ENST00000583804 NFKBIBQ15653 356 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
TOP3A-216ENST00000583804 KRT40Q6A162 431 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 FAM173BQ6P4H8 233 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 USP17L6PQ6QN14 398 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 TRIM47Q96LD4 638 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 RIC8AQ9NPQ8 531 aa12.56□□□□□ -0.4
TOP3A-216ENST00000583804 A1CFQ9NQ94 594 aaKnown RBP12.56□□□□□ -0.4
TOP3A-216ENST00000583804 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-216ENST00000583804 PFASO15067 1338 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 ESYT2A0FGR8 921 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 SLC15A5A6NIM6 579 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 POTEB2H3BUK9 544 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 BRD1O95696 1058 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 PGK2P07205 417 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 ZSCAN22P10073 491 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-216ENST00000583804 PDCP20941 246 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 RPS6P62753 249 aaKnown RBP12.55□□□□□ -0.4
TOP3A-216ENST00000583804 NUCB2P80303 420 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 SAFBQ15424 915 aaKnown RBP eCLIP12.55□□□□□ -0.4
TOP3A-216ENST00000583804 UBE2SQ16763 222 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 SLC30A10Q6XR72 485 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 DPP9Q86TI2 863 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 FCHSD1Q86WN1 690 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 FBXO18Q8NFZ0 1043 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 BICD2Q8TD16 824 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 TNPO1Q92973 898 aaKnown RBP12.55□□□□□ -0.4
TOP3A-216ENST00000583804 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 CYP39A1Q9NYL5 469 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
TOP3A-216ENST00000583804 PCNTO95613 3336 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 ADAMTS3O15072 1205 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 ADORA2AP29274 412 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 CTCFP49711 727 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-216ENST00000583804 JAKMIP3Q5VZ66 844 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 ABRAQ8N0Z2 381 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-216ENST00000583804 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
TOP3A-216ENST00000583804 SYTL5Q8TDW5 730 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-216ENST00000583804 PURBQ96QR8 312 aaKnown RBP12.54□□□□□ -0.4
TOP3A-216ENST00000583804 NUDT12Q9BQG2 462 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 PHF20Q9BVI0 1012 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 BRMS1Q9HCU9 246 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 TMEM260Q9NX78 707 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 BIN2Q9UBW5 565 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-216ENST00000583804 PCDHA4Q9UN74 947 aa12.54□□□□□ -0.4
TOP3A-216ENST00000583804 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 KIF28PB7ZC32 967 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 PIK3CDO00329 1044 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 MEIS2O14770 477 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 F13A1P00488 732 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 MMP1P03956 469 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 HSPA8P11142 646 aaKnown RBP12.53□□□□□ -0.4
TOP3A-216ENST00000583804 HOXD10P28358 340 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 KRT2P35908 639 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 HSD17B4P51659 736 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 LBX1P52954 281 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 CAP1Q01518 475 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 GNL2Q13823 731 aaKnown RBP12.53□□□□□ -0.4
TOP3A-216ENST00000583804 GRB14Q14449 540 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 MORN1Q5T089 497 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 SAMD3Q8N6K7 520 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 SLC5A4Q9NY91 659 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 MAP3K20Q9NYL2 800 aaKnown RBP12.53□□□□□ -0.4
TOP3A-216ENST00000583804 COBLO75128 1261 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
TOP3A-216ENST00000583804 CYP2B6P20813 491 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 RGS2P41220 211 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 RESTQ13127 1097 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
TOP3A-216ENST00000583804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
TOP3A-216ENST00000583804 DIS3L2Q8IYB7 885 aaKnown RBP12.53□□□□□ -0.4
TOP3A-216ENST00000583804 OXER1Q8TDS5 423 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms