RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 PFKFB3Q16875 520 aaPredicted RBP13.73□□□□□ -0.21
GGA3-217ENST00000583667 ASPRV1Q53RT3 343 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 SLC39A5Q6ZMH5 540 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 CCDC84Q86UT8 332 aaPredicted RBP13.73□□□□□ -0.21
GGA3-217ENST00000583667 CHAMP1Q96JM3 812 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 PRDM12Q9H4Q4 367 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 C11orf16Q9NQ32 467 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 RTEL1Q9NZ71 1219 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.73□□□□□ -0.21
GGA3-217ENST00000583667 MORF4L1Q9UBU8 362 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 DDX49Q9Y6V7 483 aaKnown RBP13.73□□□□□ -0.21
GGA3-217ENST00000583667 CACNA1AO00555 2505 aa13.73□□□□□ -0.21
GGA3-217ENST00000583667 DNM1LO00429 736 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 GPR37L1O60883 481 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
GGA3-217ENST00000583667 PDHBP11177 359 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
GGA3-217ENST00000583667 SAFBQ15424 915 aaKnown RBP eCLIP13.72□□□□□ -0.21
GGA3-217ENST00000583667 SIAH1Q8IUQ4 282 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 PROCA1Q8NCQ7 364 aaPredicted RBP13.72□□□□□ -0.21
GGA3-217ENST00000583667 LEO1Q8WVC0 666 aaPredicted RBP13.72□□□□□ -0.21
GGA3-217ENST00000583667 SOCS4Q8WXH5 440 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 AIFM3Q96NN9 605 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 PHF20Q9BVI0 1012 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 ASCC2Q9H1I8 757 aaPredicted RBP13.72□□□□□ -0.21
GGA3-217ENST00000583667 RIOX1Q9H6W3 641 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 PDLIM7Q9NR12 457 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 CXXC1Q9P0U4 656 aaPredicted RBP13.72□□□□□ -0.21
GGA3-217ENST00000583667 CLIP2Q9UDT6 1046 aa13.72□□□□□ -0.21
GGA3-217ENST00000583667 MORC2Q9Y6X9 1032 aaPredicted RBP13.72□□□□□ -0.21
GGA3-217ENST00000583667 KLRF2D3W0D1 207 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 PEX10O60683 326 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 CTNND1O60716 968 aaKnown RBP13.71□□□□□ -0.21
GGA3-217ENST00000583667 SCG2P13521 617 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 ITGB8P26012 769 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 NASPP49321 788 aaPredicted RBP13.71□□□□□ -0.21
GGA3-217ENST00000583667 GUCY1B3Q02153 619 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 GPATCH4Q5T3I0 446 aaKnown RBP13.71□□□□□ -0.21
GGA3-217ENST00000583667 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 GALNT17Q6IS24 598 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 FAM173BQ6P4H8 233 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 CMTR1Q8N1G2 835 aaKnown RBP13.71□□□□□ -0.21
GGA3-217ENST00000583667 STAG2Q8N3U4 1231 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 GPT2Q8TD30 523 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 LPAR1Q92633 364 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
GGA3-217ENST00000583667 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.22
GGA3-217ENST00000583667 PTPRFP10586 1907 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 hCG_1984214I3L0E3 225 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 CYTH3O43739 400 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 YEATS4O95619 227 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 SLURP2P0DP57 97 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 TFF2Q03403 129 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 ZNF543Q08ER8 600 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 SLC35G1Q2M3R5 365 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 CCDC82Q8N4S0 544 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 ZNF713Q8N859 430 aaPredicted RBP13.7□□□□□ -0.22
GGA3-217ENST00000583667 SPATA32Q96LK8 384 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
GGA3-217ENST00000583667 CABP5Q9NP86 173 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 TFIP11Q9UBB9 837 aaKnown RBP13.7□□□□□ -0.22
GGA3-217ENST00000583667 DDX20Q9UHI6 824 aaKnown RBP13.7□□□□□ -0.22
GGA3-217ENST00000583667 CHD9Q3L8U1 2897 aa13.7□□□□□ -0.22
GGA3-217ENST00000583667 KIF28PB7ZC32 967 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 EEF2P13639 858 aaKnown RBP13.69□□□□□ -0.22
GGA3-217ENST00000583667 IGFBP4P22692 258 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 CALML3P27482 149 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 KCNQ1P51787 676 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 PABPC4Q13310 644 aaKnown RBP eCLIP13.69□□□□□ -0.22
GGA3-217ENST00000583667 GSE1Q14687 1217 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 SNX17Q15036 470 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 MORN1Q5T089 497 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 GJC2Q5T442 439 aaPredicted RBP13.69□□□□□ -0.22
GGA3-217ENST00000583667 NOSTRINQ8IVI9 506 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 DIS3L2Q8IYB7 885 aaKnown RBP13.69□□□□□ -0.22
GGA3-217ENST00000583667 DCAF4Q8WV16 495 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 GMCL1Q96IK5 515 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 USP28Q96RU2 1077 aa13.69□□□□□ -0.22
GGA3-217ENST00000583667 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
GGA3-217ENST00000583667 MYH8P13535 1937 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 REV3LO60673 3130 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 FAM86C2PA6NEL3 165 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
GGA3-217ENST00000583667 FIBPO43427 364 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 GADD45BO75293 160 aaPredicted RBP13.68□□□□□ -0.22
GGA3-217ENST00000583667 PBX2P40425 430 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 RGS2P41220 211 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 SPP2Q13103 211 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 RRP1BQ14684 758 aaKnown RBP13.68□□□□□ -0.22
GGA3-217ENST00000583667 SEPT2Q15019 361 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 NPY5RQ15761 445 aa13.68□□□□□ -0.22
GGA3-217ENST00000583667 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
GGA3-217ENST00000583667 RILPL1Q5EBL4 403 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms