RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 EPOPA6NHQ4 379 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 PATL2C9JE40 543 aaKnown RBP11.41□□□□□ -0.58
MKS1-212ENST00000583577 PRKCSHP14314 528 aaPredicted RBP11.41□□□□□ -0.58
MKS1-212ENST00000583577 POU3F3P20264 500 aaPredicted RBP11.41□□□□□ -0.58
MKS1-212ENST00000583577 ACLYP53396 1101 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 KRT85P78386 507 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 ATL3Q6DD88 541 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 GIMAP6Q6P9H5 292 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 FAM227BQ96M60 508 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 FEZ1Q99689 392 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 UPF3BQ9BZI7 483 aaKnown RBP11.41□□□□□ -0.58
MKS1-212ENST00000583577 NACAP1Q9BZK3 213 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 PCDHA11Q9Y5I1 949 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 SLC4A7Q9Y6M7 1214 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 VPS13AQ96RL7 3174 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 LAMA4Q16363 1823 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 MCM3APO60318 1980 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 DMDP11532 3685 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.58
MKS1-212ENST00000583577 ZBBXA8MT70 800 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 GSG1L2A8MUP6 293 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 STRNO43815 780 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 HMGB1P09429 215 aaKnown RBP11.4□□□□□ -0.58
MKS1-212ENST00000583577 CCDC192P0DO97 292 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 CASTP20810 708 aaKnown RBP11.4□□□□□ -0.58
MKS1-212ENST00000583577 TDO2P48775 406 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
MKS1-212ENST00000583577 CATSPERGQ6ZRH7 1159 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 FAM178BQ8IXR5 827 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 PIBF1Q8WXW3 757 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 ARNTL2Q8WYA1 636 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 VTI1AQ96AJ9 217 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 EHD4Q9H223 541 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 SLC5A4Q9NY91 659 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.4□□□□□ -0.58
MKS1-212ENST00000583577 ARPP21Q9UBL0 812 aaPredicted RBP11.4□□□□□ -0.58
MKS1-212ENST00000583577 SERPINB13Q9UIV8 391 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 ZBTB21Q9ULJ3 1066 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 KIF3AQ9Y496 699 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 MYH4Q9Y623 1939 aa11.4□□□□□ -0.58
MKS1-212ENST00000583577 SCN5AQ14524 2016 aa11.4□□□□□ -0.59
MKS1-212ENST00000583577 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 USP17L12C9JPN9 530 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 USP17L21D6R901 530 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 KDM4AO75164 1064 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 CA3P07451 260 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 TAL1P17542 331 aaPredicted RBP11.39□□□□□ -0.59
MKS1-212ENST00000583577 PLCD1P51178 756 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 CTR9Q6PD62 1173 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
MKS1-212ENST00000583577 HFE2Q6ZVN8 426 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
MKS1-212ENST00000583577 IFNL3Q8IZI9 196 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 MAML3Q96JK9 1138 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 TSEN34Q9BSV6 310 aaKnown RBP11.39□□□□□ -0.59
MKS1-212ENST00000583577 MOV10L1Q9BXT6 1211 aaKnown RBP11.39□□□□□ -0.59
MKS1-212ENST00000583577 NAPBQ9H115 298 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
MKS1-212ENST00000583577 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 MYO7AQ13402 2215 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 TCHHQ07283 1943 aa11.39□□□□□ -0.59
MKS1-212ENST00000583577 CHD8Q9HCK8 2581 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
MKS1-212ENST00000583577 DCXO43602 365 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 GFRA3O60609 400 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 ERCC3P19447 782 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 GJB2P29033 226 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 GTF2F1P35269 517 aaKnown RBP eCLIP11.38□□□□□ -0.59
MKS1-212ENST00000583577 DHX8Q14562 1220 aaKnown RBP11.38□□□□□ -0.59
MKS1-212ENST00000583577 KCNA10Q16322 511 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 SBK1Q52WX2 424 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 TMEM67Q5HYA8 995 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 C12orf60Q5U649 245 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 BLOC1S2Q6QNY1 142 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.38□□□□□ -0.59
MKS1-212ENST00000583577 JAKMIP1Q96N16 626 aaKnown RBP11.38□□□□□ -0.59
MKS1-212ENST00000583577 LLPHQ9BRT6 129 aaKnown RBP11.38□□□□□ -0.59
MKS1-212ENST00000583577 FUCA2Q9BTY2 467 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
MKS1-212ENST00000583577 DNAJC18Q9H819 358 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 EPB41L4AQ9HCS5 686 aaPredicted RBP11.38□□□□□ -0.59
MKS1-212ENST00000583577 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 SWAP70Q9UH65 585 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 GVINP1Q7Z2Y8 2422 aa11.38□□□□□ -0.59
MKS1-212ENST00000583577 COL11A1P12107 1806 aaPredicted RBP11.37□□□□□ -0.59
MKS1-212ENST00000583577 MOXD2PA6NHM9 499 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 TLR3O15455 904 aaKnown RBP11.37□□□□□ -0.59
MKS1-212ENST00000583577 CYP2D6P10635 497 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 HSPD1P10809 573 aaKnown RBP11.37□□□□□ -0.59
MKS1-212ENST00000583577 IL9P15248 144 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
MKS1-212ENST00000583577 VCAM1P19320 739 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 CDK7P50613 346 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 CCL23P55773 120 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 PLS1Q14651 629 aa11.37□□□□□ -0.59
MKS1-212ENST00000583577 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
MKS1-212ENST00000583577 CREB3L3Q68CJ9 461 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms