RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PALM3A6NDB9 673 aaPredicted RBP28.95■■■□□ 2.22
TSEN54-209ENST00000583454 KIAA0355O15063 1070 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 CLTBP09497 229 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 CST5P28325 142 aaPredicted RBP28.95■■■□□ 2.22
TSEN54-209ENST00000583454 GRM4Q14833 912 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 FAM109BQ6ICB4 259 aaPredicted RBP28.95■■■□□ 2.22
TSEN54-209ENST00000583454 CATIPQ7Z7H3 387 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 UBA5Q9GZZ9 404 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 UPF3AQ9H1J1 476 aaKnown RBP28.95■■■□□ 2.22
TSEN54-209ENST00000583454 ABHD16BQ9H3Z7 469 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 ACAD9Q9H845 621 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 RNF146Q9NTX7 359 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 MAD2L2Q9UI95 211 aa28.95■■■□□ 2.22
TSEN54-209ENST00000583454 ASTN1O14525 1302 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 SOWAHBA6NEL2 793 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 CCDC144BQ3MJ40 725 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 ANKRD33Q7Z3H0 272 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 CCDC144CPQ8IYA2 1237 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 STAG2Q8N3U4 1231 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 MAP3K14Q99558 947 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 LRRC2Q9BYS8 371 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 CPVLQ9H3G5 476 aa28.94■■■□□ 2.22
TSEN54-209ENST00000583454 MOXD2PA6NHM9 499 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 PQBP1O60828 265 aaKnown RBP28.93■■■□□ 2.22
TSEN54-209ENST00000583454 EIF5BO60841 1220 aaKnown RBP28.93■■■□□ 2.22
TSEN54-209ENST00000583454 ICAM1P05362 532 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 KCNA10Q16322 511 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 TKFCQ3LXA3 575 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 CCDC174Q6PII3 467 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 SGMS1Q86VZ5 419 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 ZNF654Q8IZM8 581 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 SLC17A8Q8NDX2 589 aa28.93■■■□□ 2.22
TSEN54-209ENST00000583454 JAKMIP1Q96N16 626 aaKnown RBP28.93■■■□□ 2.22
TSEN54-209ENST00000583454 PRUNE2Q8WUY3 3088 aa28.92■■■□□ 2.22
TSEN54-209ENST00000583454 KLRF2D3W0D1 207 aa28.92■■■□□ 2.22
TSEN54-209ENST00000583454 CTAGE5O15320 804 aa28.92■■■□□ 2.22
TSEN54-209ENST00000583454 EPHB4P54760 987 aa28.92■■■□□ 2.22
TSEN54-209ENST00000583454 FAAP100Q0VG06 881 aa28.92■■■□□ 2.22
TSEN54-209ENST00000583454 GUCD1Q96NT3 240 aa28.92■■■□□ 2.22
TSEN54-209ENST00000583454 BAZ2BQ9UIF8 2168 aaKnown RBP28.92■■■□□ 2.22
TSEN54-209ENST00000583454 DDAH1O94760 285 aa28.91■■■□□ 2.22
TSEN54-209ENST00000583454 GJA9P57773 515 aa28.91■■■□□ 2.22
TSEN54-209ENST00000583454 MUM1L1Q5H9M0 696 aa28.91■■■□□ 2.22
TSEN54-209ENST00000583454 ADGRF4Q8IZF3 695 aa28.91■■■□□ 2.22
TSEN54-209ENST00000583454 TOX2Q96NM4 488 aa28.91■■■□□ 2.22
TSEN54-209ENST00000583454 TRERF1Q96PN7 1200 aa28.91■■■□□ 2.22
TSEN54-209ENST00000583454 STARD7Q9NQZ5 370 aa28.91■■■□□ 2.22
TSEN54-209ENST00000583454 CCDC69A6NI79 296 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 PSMA5P28066 241 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 NKX3-2P78367 333 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 NFXL1Q6ZNB6 911 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 NUP133Q8WUM0 1156 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 TCEANC2Q96MN5 208 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 JMJD4Q9H9V9 463 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 PNMA2Q9UL42 364 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 CCPG1Q9ULG6 757 aa28.9■■■□□ 2.22
TSEN54-209ENST00000583454 DDX49Q9Y6V7 483 aaKnown RBP28.9■■■□□ 2.22
TSEN54-209ENST00000583454 C6orf222P0C671 652 aaPredicted RBP28.89■■■□□ 2.22
TSEN54-209ENST00000583454 ALAS1P13196 640 aa28.89■■■□□ 2.22
TSEN54-209ENST00000583454 BLOC1S2Q6QNY1 142 aa28.89■■■□□ 2.22
TSEN54-209ENST00000583454 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.88■■■□□ 2.21
TSEN54-209ENST00000583454 ASGR1P07306 291 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 CPA1P15085 419 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 CDK7P50613 346 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 FBXL16Q8N461 479 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 CYP39A1Q9NYL5 469 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 TBX21Q9UL17 535 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 GTF3C3Q9Y5Q9 886 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 ELP1O95163 1332 aa28.88■■■□□ 2.21
TSEN54-209ENST00000583454 CHD9Q3L8U1 2897 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 SEC24BO95487 1268 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 RPS6KB1P23443 525 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 SLC35G1Q2M3R5 365 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 MTMR8Q96EF0 704 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 MYL10Q9BUA6 226 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 TM6SF1Q9BZW5 370 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 RIOX1Q9H6W3 641 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 SLC12A7Q9Y666 1083 aa28.87■■■□□ 2.21
TSEN54-209ENST00000583454 MYH6P13533 1939 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 CALM1P0DP23 149 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 CALM2P0DP24 149 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 CALM3P0DP25 149 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 RAG1P15918 1043 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 CDC37Q16543 378 aaPredicted RBP28.86■■■□□ 2.21
TSEN54-209ENST00000583454 C8orf34Q49A92 452 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 PCSK9Q8NBP7 692 aaKnown RBP28.86■■■□□ 2.21
TSEN54-209ENST00000583454 ZSWIM6Q9HCJ5 1215 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 VAT1LQ9HCJ6 419 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 TMEM39AQ9NV64 488 aa28.86■■■□□ 2.21
TSEN54-209ENST00000583454 GNEQ9Y223 722 aaKnown RBP28.86■■■□□ 2.21
TSEN54-209ENST00000583454 CASTP20810 708 aaKnown RBP28.85■■■□□ 2.21
TSEN54-209ENST00000583454 PTGS1P23219 599 aa28.85■■■□□ 2.21
TSEN54-209ENST00000583454 KIF5BP33176 963 aa28.85■■■□□ 2.21
TSEN54-209ENST00000583454 CTCFLQ8NI51 663 aaPredicted RBP28.85■■■□□ 2.21
TSEN54-209ENST00000583454 GLT1D1Q96MS3 346 aa28.85■■■□□ 2.21
TSEN54-209ENST00000583454 FAM161BQ96MY7 647 aa28.85■■■□□ 2.21
TSEN54-209ENST00000583454 PURBQ96QR8 312 aaKnown RBP28.85■■■□□ 2.21
TSEN54-209ENST00000583454 BRPF3Q9ULD4 1205 aa28.85■■■□□ 2.21
TSEN54-209ENST00000583454 DCDC2CA8MYV0 355 aa28.84■■■□□ 2.21
TSEN54-209ENST00000583454 DHX16O60231 1041 aaKnown RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms