RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 RIOX2Q8IUF8 465 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 SMCR8Q8TEV9 937 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 FOXD4L4Q8WXT5 416 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 TRERF1Q96PN7 1200 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 PAGR1Q9BTK6 254 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 SPATC1LQ9H0A9 340 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 FOXP1Q9H334 677 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ZSCAN16Q9H4T2 348 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 BRMS1Q9HCU9 246 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 KIF28PB7ZC32 967 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 F13A1P00488 732 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 RESTQ13127 1097 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 TEX2Q8IWB9 1127 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 GPRC5AQ8NFJ5 357 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 BICD2Q8TD16 824 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 TBC1D5Q92609 795 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 CUL5Q93034 780 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 TNFRSF25Q93038 417 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 EFCC1Q9HA90 598 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 PCDHA6Q9UN73 950 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 PCDHA8Q9Y5H6 950 aa18.75■□□□□ 0.59
CDK5RAP3-228ENST00000583363 COL11A1P12107 1806 aaPredicted RBP18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MEIS2O14770 477 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ERVK-9P63128 1117 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ERVK-24P63145 666 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 SP3Q02447 781 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 NR5A1Q13285 461 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 TAF1CQ15572 869 aaPredicted RBP18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MUM1L1Q5H9M0 696 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 FERMT3Q86UX7 667 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 SAMD3Q8N6K7 520 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ARMC5Q96C12 935 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MOV10L1Q9BXT6 1211 aaKnown RBP18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MORF4L1Q9UBU8 362 aa18.74■□□□□ 0.59
CDK5RAP3-228ENST00000583363 PIK3CDO00329 1044 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 SLC25A27O95847 323 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 CLK2P49760 499 aaKnown RBP18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 GHRHRQ02643 423 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MCF2L2Q86YR7 1114 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ANKRD13CQ8N6S4 541 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 CHST13Q8NET6 341 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MAF1Q9H063 256 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ZFYVE28Q9HCC9 887 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 RNF146Q9NTX7 359 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 BIN2Q9UBW5 565 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ADGRA2Q96PE1 1338 aa18.73■□□□□ 0.59
CDK5RAP3-228ENST00000583363 GCOM1H8Y6P7 765 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 NFIBO00712 420 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 POLR2MP0CAP2 368 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 EN2P19622 333 aaPredicted RBP18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 COPB2P35606 906 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 GNL2Q13823 731 aaKnown RBP18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 USP17L6PQ6QN14 398 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 BRAPQ7Z569 592 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 NOSTRINQ8IVI9 506 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 RASGRP4Q8TDF6 673 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 HOMER2Q9NSB8 354 aa18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MAP3K20Q9NYL2 800 aaKnown RBP18.72■□□□□ 0.59
CDK5RAP3-228ENST00000583363 A0A0G2JMZ2 1700 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 TLR2O60603 784 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 CFBP00751 764 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 BCRP11274 1271 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ERCC3P19447 782 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 HSD17B4P51659 736 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 UBE2SQ16763 222 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 EARS2Q5JPH6 523 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 JAKMIP3Q5VZ66 844 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 C17orf99Q6UX52 265 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 REXO1Q8N1G1 1221 aaKnown RBP18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 SHCBP1Q8NEM2 672 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ACAD9Q9H845 621 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 TMEM260Q9NX78 707 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 FBXO40Q9UH90 709 aa18.71■□□□□ 0.59
CDK5RAP3-228ENST00000583363 CCNA1P78396 465 aa18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 FAM110CQ1W6H9 321 aa18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 HABP4Q5JVS0 413 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 MCTP2Q6DN12 878 aa18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 KRT25Q7Z3Z0 450 aa18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 NCAPG2Q86XI2 1143 aa18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 TNPO1Q92973 898 aaKnown RBP18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 MROH8Q9H579 483 aa18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 CPA4Q9UI42 421 aa18.7■□□□□ 0.58
CDK5RAP3-228ENST00000583363 FOSP01100 380 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-228ENST00000583363 HOXA13P31271 388 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-228ENST00000583363 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
CDK5RAP3-228ENST00000583363 RNF207Q6ZRF8 634 aa18.69■□□□□ 0.58
CDK5RAP3-228ENST00000583363 PIK3AP1Q6ZUJ8 805 aa18.69■□□□□ 0.58
CDK5RAP3-228ENST00000583363 ATP6V1DQ9Y5K8 247 aa18.69■□□□□ 0.58
CDK5RAP3-228ENST00000583363 ZSWIM8A7E2V4 1837 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 CCDC194A0A1B0GVG4 234 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 RPS6P62753 249 aaKnown RBP18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 AP3B2Q13367 1082 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 BAATQ14032 418 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 MYSM1Q5VVJ2 828 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 NSMFQ6X4W1 530 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 SYTL5Q8TDW5 730 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 ZNF333Q96JL9 665 aa18.68■□□□□ 0.58
CDK5RAP3-228ENST00000583363 PORCNQ9H237 461 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms