RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 NUP88Q99567 741 aaPredicted RBP23.68■■□□□ 1.38
SNX11-209ENST00000581705 SPZ1Q9BXG8 430 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 SLC26A6Q9BXS9 759 aa23.68■■□□□ 1.38
SNX11-209ENST00000581705 ZNF214Q9UL59 606 aaPredicted RBP23.68■■□□□ 1.38
SNX11-209ENST00000581705 CYBAP13498 195 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 STAT3P40763 770 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 PHKBQ93100 1093 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 GBP4Q96PP9 640 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 SLF1Q9BQI6 1058 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 MYH6P13533 1939 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 CNTNAP5Q8WYK1 1306 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 COL11A1P12107 1806 aaPredicted RBP23.67■■□□□ 1.38
SNX11-209ENST00000581705 H3BQV1 296 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 PLEKHA8P1O95397 391 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 CNGA1P29973 690 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 C7orf61Q8IZ16 206 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 LRRC47Q8N1G4 583 aaKnown RBP23.67■■□□□ 1.38
SNX11-209ENST00000581705 GMCL1Q96IK5 515 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 C8orf76Q96K31 380 aa23.67■■□□□ 1.38
SNX11-209ENST00000581705 F13A1P00488 732 aa23.66■■□□□ 1.38
SNX11-209ENST00000581705 COPB2P35606 906 aa23.66■■□□□ 1.38
SNX11-209ENST00000581705 SRBD1Q8N5C6 995 aaKnown RBP23.66■■□□□ 1.38
SNX11-209ENST00000581705 FBXO18Q8NFZ0 1043 aa23.66■■□□□ 1.38
SNX11-209ENST00000581705 MAML3Q96JK9 1138 aa23.66■■□□□ 1.38
SNX11-209ENST00000581705 ALG1Q9BT22 464 aa23.66■■□□□ 1.38
SNX11-209ENST00000581705 VPS37CA5D8V6 355 aaPredicted RBP23.65■■□□□ 1.38
SNX11-209ENST00000581705 KLRF2D3W0D1 207 aa23.65■■□□□ 1.38
SNX11-209ENST00000581705 XBP1P17861 261 aa23.65■■□□□ 1.38
SNX11-209ENST00000581705 ZNF543Q08ER8 600 aa23.65■■□□□ 1.38
SNX11-209ENST00000581705 MMP19Q99542 508 aa23.65■■□□□ 1.38
SNX11-209ENST00000581705 ZSCAN16Q9H4T2 348 aaPredicted RBP23.65■■□□□ 1.38
SNX11-209ENST00000581705 FRMPD3Q5JV73 1810 aa23.65■■□□□ 1.38
SNX11-209ENST00000581705 TRIM29Q14134 588 aa23.64■■□□□ 1.37
SNX11-209ENST00000581705 PRPF38AQ8NAV1 312 aaKnown RBP23.64■■□□□ 1.37
SNX11-209ENST00000581705 TEX13BQ9BXU2 312 aa23.64■■□□□ 1.37
SNX11-209ENST00000581705 KCTD2Q14681 263 aa23.63■■□□□ 1.37
SNX11-209ENST00000581705 SLFN13Q68D06 897 aa23.63■■□□□ 1.37
SNX11-209ENST00000581705 STAG2Q8N3U4 1231 aa23.63■■□□□ 1.37
SNX11-209ENST00000581705 SZT2Q5T011 3432 aa23.63■■□□□ 1.37
SNX11-209ENST00000581705 SEPT4O43236 478 aa23.62■■□□□ 1.37
SNX11-209ENST00000581705 RIOX1Q9H6W3 641 aa23.62■■□□□ 1.37
SNX11-209ENST00000581705 ZMYND8Q9ULU4 1186 aaPredicted RBP23.62■■□□□ 1.37
SNX11-209ENST00000581705 DIS3Q9Y2L1 958 aaKnown RBP23.62■■□□□ 1.37
SNX11-209ENST00000581705 V9GY48 417 aaPredicted RBP23.62■■□□□ 1.37
SNX11-209ENST00000581705 ZNFX1Q9P2E3 1918 aaKnown RBP23.62■■□□□ 1.37
SNX11-209ENST00000581705 A0A1W2PPC1 479 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 DNM1LO00429 736 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 PGK2P07205 417 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 SLC1A4P43007 532 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 PKN1Q16512 942 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 PFKFB3Q16875 520 aaPredicted RBP23.61■■□□□ 1.37
SNX11-209ENST00000581705 ZNF792Q3KQV3 632 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 SH3GLB2Q9NR46 395 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 FEM1BQ9UK73 627 aa23.61■■□□□ 1.37
SNX11-209ENST00000581705 hCG_1984214I3L0E3 225 aa23.6■■□□□ 1.37
SNX11-209ENST00000581705 LRRC26Q2I0M4 334 aa23.6■■□□□ 1.37
SNX11-209ENST00000581705 PRAMEF19Q5SWL8 479 aa23.6■■□□□ 1.37
SNX11-209ENST00000581705 SNRNP48Q6IEG0 339 aaKnown RBP23.6■■□□□ 1.37
SNX11-209ENST00000581705 CMTR1Q8N1G2 835 aaKnown RBP23.6■■□□□ 1.37
SNX11-209ENST00000581705 ZNF713Q8N859 430 aaPredicted RBP23.6■■□□□ 1.37
SNX11-209ENST00000581705 GDF15Q99988 308 aa23.6■■□□□ 1.37
SNX11-209ENST00000581705 NRBP1Q9UHY1 535 aa23.6■■□□□ 1.37
SNX11-209ENST00000581705 RIPK3Q9Y572 518 aa23.6■■□□□ 1.37
SNX11-209ENST00000581705 LAMA3Q16787 3333 aa23.6■■□□□ 1.37
SNX11-209ENST00000581705 DTNBO60941 627 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 ZBED4O75132 1171 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 BMP3P12645 472 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 SCG2P13521 617 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 CCDC82Q8N4S0 544 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 KIFC2Q96AC6 838 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 TINF2Q9BSI4 451 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 SENP6Q9GZR1 1112 aaPredicted RBP23.59■■□□□ 1.37
SNX11-209ENST00000581705 SLC38A10Q9HBR0 1119 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 DNAH12Q6ZR08 3092 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 CYTH3O43739 400 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 PLA2G6O60733 806 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 BAG4O95429 457 aaKnown RBP23.59■■□□□ 1.37
SNX11-209ENST00000581705 PTMSP20962 102 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 CCDC96Q2M329 555 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 KRT40Q6A162 431 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 ARRDC4Q8NCT1 418 aa23.59■■□□□ 1.37
SNX11-209ENST00000581705 RRP36Q96EU6 259 aaKnown RBP23.59■■□□□ 1.37
SNX11-209ENST00000581705 GOLGA6L22H0YM25 854 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 GOLGA8HP0CJ92 632 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 SYN1P17600 705 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 BMP8BP34820 402 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 RESTQ13127 1097 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 SAFBQ15424 915 aaKnown RBP eCLIP23.58■■□□□ 1.36
SNX11-209ENST00000581705 ANO1Q5XXA6 986 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 ATL3Q6DD88 541 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 BTNL9Q6UXG8 535 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 BRAPQ7Z569 592 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 CPXCR1Q8N123 301 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 MTMR7Q9Y216 660 aa23.58■■□□□ 1.36
SNX11-209ENST00000581705 PPFIA3O75145 1194 aa23.57■■□□□ 1.36
SNX11-209ENST00000581705 SLC35G1Q2M3R5 365 aa23.57■■□□□ 1.36
SNX11-209ENST00000581705 GJC2Q5T442 439 aaPredicted RBP23.57■■□□□ 1.36
SNX11-209ENST00000581705 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.57■■□□□ 1.36
SNX11-209ENST00000581705 MTMR8Q96EF0 704 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms