RNA–Protein interactions for RNA: ENST00000580920.1

MIR4258-201, Transcript of microRNA 4258, humanhuman

BASIC

Gene MIR4258, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4258-201ENST00000580920 PRRX2Q99811 253 aa9.44□□□□□ -0.9
MIR4258-201ENST00000580920 FSD1Q9BTV5 496 aa9.44□□□□□ -0.9
MIR4258-201ENST00000580920 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.44□□□□□ -0.9
MIR4258-201ENST00000580920 UPF3BQ9BZI7 483 aaKnown RBP9.44□□□□□ -0.9
MIR4258-201ENST00000580920 CRNKL1Q9BZJ0 848 aaKnown RBP9.44□□□□□ -0.9
MIR4258-201ENST00000580920 SLC38A10Q9HBR0 1119 aa9.44□□□□□ -0.9
MIR4258-201ENST00000580920 TLR9Q9NR96 1032 aa9.44□□□□□ -0.9
MIR4258-201ENST00000580920 SWAP70Q9UH65 585 aa9.44□□□□□ -0.9
MIR4258-201ENST00000580920 FAM50BQ9Y247 325 aa9.44□□□□□ -0.9
MIR4258-201ENST00000580920 PRKAB2O43741 272 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 NBNO60934 754 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 PDE6AP16499 860 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 ID4P47928 161 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 CDK8P49336 464 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 G3BP1Q13283 466 aaKnown RBP eCLIP9.43□□□□□ -0.9
MIR4258-201ENST00000580920 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 CNKSR3Q6P9H4 555 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 RETREG2Q8NC44 543 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 PURBQ96QR8 312 aaKnown RBP9.43□□□□□ -0.9
MIR4258-201ENST00000580920 NSUN3Q9H649 340 aaKnown RBP9.43□□□□□ -0.9
MIR4258-201ENST00000580920 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 GPR108Q9NPR9 543 aa9.43□□□□□ -0.9
MIR4258-201ENST00000580920 NOB1Q9ULX3 412 aaKnown RBP9.43□□□□□ -0.9
MIR4258-201ENST00000580920 PROB1E7EW31 1015 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 E9PSI1 815 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 IGSF3O75054 1194 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 KDM4AO75164 1064 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 CSPG5O95196 566 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 PDGFBP01127 241 aaPredicted RBP9.42□□□□□ -0.9
MIR4258-201ENST00000580920 GTF2F1P35269 517 aaKnown RBP eCLIP9.42□□□□□ -0.9
MIR4258-201ENST00000580920 BFSP2Q13515 415 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 EPC2Q52LR7 807 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.42□□□□□ -0.9
MIR4258-201ENST00000580920 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 LRRC8DQ7L1W4 858 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 PRPF38AQ8NAV1 312 aaKnown RBP9.42□□□□□ -0.9
MIR4258-201ENST00000580920 CHST13Q8NET6 341 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 ASIC4Q96FT7 647 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 CRBNQ96SW2 442 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 POP1Q99575 1024 aaKnown RBP9.42□□□□□ -0.9
MIR4258-201ENST00000580920 MTG1Q9BT17 334 aaPredicted RBP9.42□□□□□ -0.9
MIR4258-201ENST00000580920 CCDC8Q9H0W5 538 aaPredicted RBP9.42□□□□□ -0.9
MIR4258-201ENST00000580920 ACAD9Q9H845 621 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 ARMT1Q9H993 441 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 RNF146Q9NTX7 359 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 FBXO40Q9UH90 709 aa9.42□□□□□ -0.9
MIR4258-201ENST00000580920 NLRC5Q86WI3 1866 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 ZNF532Q9HCE3 1301 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 TCRBV5S4A2TA0A5A2 114 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 ASB14A6NK59 587 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 STXBP3O00186 592 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 LINC01565O15544 149 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 ZBED4O75132 1171 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 CXCL10P02778 98 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 CHMP4BP1P59074 171 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 ZXDAP98168 799 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 HYAL1Q12794 435 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
MIR4258-201ENST00000580920 SMAD4Q13485 552 aaKnown RBP9.41□□□□□ -0.9
MIR4258-201ENST00000580920 MBTPS1Q14703 1052 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 PTPROQ16827 1216 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 OR6J1Q8NGC5 347 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
MIR4258-201ENST00000580920 AFAP1L1Q8TED9 768 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 KANSL2Q9H9L4 492 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 HDAC5Q9UQL6 1122 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 TNNQ9UQP3 1299 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 NOD1Q9Y239 953 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 COG6Q9Y2V7 657 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 Q9Y3F1 56 aa9.41□□□□□ -0.9
MIR4258-201ENST00000580920 F5H6K3 240 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 H3BNC9 293 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 CHGBP05060 677 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 GNAI3P08754 354 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 SELPP16109 830 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 HTRA4P83105 476 aaPredicted RBP9.4□□□□□ -0.9
MIR4258-201ENST00000580920 KLRC3Q07444 240 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 LRRFIP1Q32MZ4 808 aaKnown RBP9.4□□□□□ -0.9
MIR4258-201ENST00000580920 DUSP28Q4G0W2 176 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 MUM1L1Q5H9M0 696 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 IQSEC1Q6DN90 963 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 GDF6Q6KF10 455 aaPredicted RBP9.4□□□□□ -0.9
MIR4258-201ENST00000580920 NFRKBQ6P4R8 1299 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 TRAF7Q6Q0C0 670 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 KIAA1211Q6ZU35 1233 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 COPS5Q92905 334 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 WNT8BQ93098 351 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
MIR4258-201ENST00000580920 CCDC17Q96LX7 622 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 VTA1Q9NP79 307 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 TRPC6Q9Y210 931 aa9.4□□□□□ -0.9
MIR4258-201ENST00000580920 CTDP1Q9Y5B0 961 aaPredicted RBP9.4□□□□□ -0.9
MIR4258-201ENST00000580920 CHD6Q8TD26 2715 aa9.4□□□□□ -0.91
MIR4258-201ENST00000580920 RIF1Q5UIP0 2472 aaKnown RBP9.39□□□□□ -0.91
MIR4258-201ENST00000580920 LGR5O75473 907 aa9.39□□□□□ -0.91
MIR4258-201ENST00000580920 MBD4O95243 580 aa9.39□□□□□ -0.91
MIR4258-201ENST00000580920 AVPR2P30518 371 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms