RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 COL9A3Q14050 684 aaPredicted RBP19.01■□□□□ 0.63
IFT20-210ENST00000580357 HABP4Q5JVS0 413 aaKnown RBP19.01■□□□□ 0.63
IFT20-210ENST00000580357 Q6ZUG5 572 aa19.01■□□□□ 0.63
IFT20-210ENST00000580357 HOMER1Q86YM7 354 aa19.01■□□□□ 0.63
IFT20-210ENST00000580357 TAL1P17542 331 aaPredicted RBP19■□□□□ 0.63
IFT20-210ENST00000580357 ALDH5A1P51649 535 aaPredicted RBP19■□□□□ 0.63
IFT20-210ENST00000580357 GHRHRQ02643 423 aa19■□□□□ 0.63
IFT20-210ENST00000580357 IQSEC1Q6DN90 963 aa19■□□□□ 0.63
IFT20-210ENST00000580357 MICU3Q86XE3 530 aa19■□□□□ 0.63
IFT20-210ENST00000580357 SRBD1Q8N5C6 995 aaKnown RBP19■□□□□ 0.63
IFT20-210ENST00000580357 PAWRQ96IZ0 340 aaKnown RBP19■□□□□ 0.63
IFT20-210ENST00000580357 TCEANC2Q96MN5 208 aa19■□□□□ 0.63
IFT20-210ENST00000580357 IWS1Q96ST2 819 aa19■□□□□ 0.63
IFT20-210ENST00000580357 AGXT2Q9BYV1 514 aa19■□□□□ 0.63
IFT20-210ENST00000580357 ZHX1Q9UKY1 873 aaPredicted RBP19■□□□□ 0.63
IFT20-210ENST00000580357 KLF18A0A0U1RQI7 1052 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 DUSP11O75319 330 aaKnown RBP18.99■□□□□ 0.63
IFT20-210ENST00000580357 RTN1Q16799 776 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 SLC35G1Q2M3R5 365 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 TMTC3Q6ZXV5 915 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 RNF180Q86T96 592 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 NSUN6Q8TEA1 469 aaKnown RBP18.99■□□□□ 0.63
IFT20-210ENST00000580357 BRF1Q92994 677 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 C11orf49Q9H6J7 331 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 SPC25Q9HBM1 224 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 VTA1Q9NP79 307 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 BRPF3Q9ULD4 1205 aa18.99■□□□□ 0.63
IFT20-210ENST00000580357 SMCHD1A6NHR9 2005 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 KBTBD13C9JR72 458 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 DNM1LO00429 736 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 PPP1R11O60927 126 aaPredicted RBP18.98■□□□□ 0.63
IFT20-210ENST00000580357 CFBP00751 764 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 HSD17B4P51659 736 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 PDE4DQ08499 809 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 CCDC144BQ3MJ40 725 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 SLC30A10Q6XR72 485 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 XPNPEP3Q9NQH7 507 aa18.98■□□□□ 0.63
IFT20-210ENST00000580357 GOLGA8AA7E2F4 631 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 GOLGA8BA8MQT2 603 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 GCOM1H8Y6P7 765 aaPredicted RBP18.97■□□□□ 0.63
IFT20-210ENST00000580357 PLEKHA8P1O95397 391 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 POLR2MP0CAP2 368 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 CPA1P15085 419 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 RXRAP19793 462 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 MNX1P50219 401 aaPredicted RBP18.97■□□□□ 0.63
IFT20-210ENST00000580357 EVCP57679 992 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 SYTL5Q8TDW5 730 aaPredicted RBP18.97■□□□□ 0.63
IFT20-210ENST00000580357 TBC1D5Q92609 795 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 DPF3Q92784 378 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 NAP1L2Q9ULW6 460 aaPredicted RBP18.97■□□□□ 0.63
IFT20-210ENST00000580357 Q9Y3F1 56 aa18.97■□□□□ 0.63
IFT20-210ENST00000580357 EDNRBP24530 442 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 METAP2P50579 478 aaKnown RBP eCLIP18.96■□□□□ 0.63
IFT20-210ENST00000580357 TNFAIP2Q03169 654 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 APOBRQ0VD83 1088 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 ARHGEF16Q5VV41 709 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 TEX2Q8IWB9 1127 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 CCDC82Q8N4S0 544 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 CUL5Q93034 780 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 TAAR1Q96RJ0 339 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 RMDN3Q96TC7 470 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 TSEN34Q9BSV6 310 aaKnown RBP18.96■□□□□ 0.63
IFT20-210ENST00000580357 KATNBL1Q9H079 304 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 ASTN1O14525 1302 aa18.96■□□□□ 0.63
IFT20-210ENST00000580357 COL6A1P12109 1028 aa18.95■□□□□ 0.62
IFT20-210ENST00000580357 LRRC41Q15345 812 aa18.95■□□□□ 0.62
IFT20-210ENST00000580357 STXBP2Q15833 593 aa18.95■□□□□ 0.62
IFT20-210ENST00000580357 ANO1Q5XXA6 986 aa18.95■□□□□ 0.62
IFT20-210ENST00000580357 PIBF1Q8WXW3 757 aa18.95■□□□□ 0.62
IFT20-210ENST00000580357 ZNF274Q96GC6 653 aaPredicted RBP18.95■□□□□ 0.62
IFT20-210ENST00000580357 PURBQ96QR8 312 aaKnown RBP18.95■□□□□ 0.62
IFT20-210ENST00000580357 ALDH8A1Q9H2A2 487 aaPredicted RBP18.95■□□□□ 0.62
IFT20-210ENST00000580357 PDRG1Q9NUG6 133 aa18.95■□□□□ 0.62
IFT20-210ENST00000580357 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
IFT20-210ENST00000580357 NR2E3Q9Y5X4 410 aa18.95■□□□□ 0.62
IFT20-210ENST00000580357 MYH6P13533 1939 aa18.94■□□□□ 0.62
IFT20-210ENST00000580357 RBM47A0AV96 593 aaKnown RBP18.94■□□□□ 0.62
IFT20-210ENST00000580357 hCG_1984214I3L0E3 225 aa18.94■□□□□ 0.62
IFT20-210ENST00000580357 OPLAHO14841 1288 aa18.94■□□□□ 0.62
IFT20-210ENST00000580357 GJC2Q5T442 439 aaPredicted RBP18.94■□□□□ 0.62
IFT20-210ENST00000580357 TAPT1Q6NXT6 567 aa18.94■□□□□ 0.62
IFT20-210ENST00000580357 NOL8Q76FK4 1167 aaKnown RBP18.94■□□□□ 0.62
IFT20-210ENST00000580357 RAB11FIP4Q86YS3 637 aa18.94■□□□□ 0.62
IFT20-210ENST00000580357 ZNF713Q8N859 430 aaPredicted RBP18.94■□□□□ 0.62
IFT20-210ENST00000580357 DIS3LQ8TF46 1054 aaKnown RBP18.94■□□□□ 0.62
IFT20-210ENST00000580357 IL17RAQ96F46 866 aa18.94■□□□□ 0.62
IFT20-210ENST00000580357 SENP6Q9GZR1 1112 aaPredicted RBP18.94■□□□□ 0.62
IFT20-210ENST00000580357 NKRFO15226 690 aaKnown RBP eCLIP18.93■□□□□ 0.62
IFT20-210ENST00000580357 EIF3JO75822 258 aaKnown RBP18.93■□□□□ 0.62
IFT20-210ENST00000580357 GJA9P57773 515 aa18.93■□□□□ 0.62
IFT20-210ENST00000580357 NKX3-2P78367 333 aa18.93■□□□□ 0.62
IFT20-210ENST00000580357 ANKRD1Q15327 319 aa18.93■□□□□ 0.62
IFT20-210ENST00000580357 EEPD1Q7L9B9 569 aa18.93■□□□□ 0.62
IFT20-210ENST00000580357 CMTR1Q8N1G2 835 aaKnown RBP18.93■□□□□ 0.62
IFT20-210ENST00000580357 PCSK9Q8NBP7 692 aaKnown RBP18.93■□□□□ 0.62
IFT20-210ENST00000580357 AP5M1Q9H0R1 490 aa18.93■□□□□ 0.62
IFT20-210ENST00000580357 UPF3AQ9H1J1 476 aaKnown RBP18.93■□□□□ 0.62
IFT20-210ENST00000580357 PSTPIP2Q9H939 334 aa18.93■□□□□ 0.62
IFT20-210ENST00000580357 PXMP2Q9NR77 195 aa18.93■□□□□ 0.62
IFT20-210ENST00000580357 FAM217BQ9NTX9 383 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms