RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 SOS1Q07889 1333 aaPredicted RBP8.78□□□□□ -1
PPP4R1-216ENST00000580283 SPINK2P20155 84 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 NTF4P34130 210 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 EIF4A2Q14240 407 aaKnown RBP8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 TSNAXIP1Q2TAA8 658 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 DEFB115Q30KQ5 88 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 CYFIP1Q7L576 1253 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 DTX1Q86Y01 620 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 DNAJC10Q8IXB1 793 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 TOP6BLQ8N6T0 577 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 PHC3Q8NDX5 983 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 TAF1DQ9H5J8 278 aaPredicted RBP8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 NARFQ9UHQ1 456 aa8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 WDR33Q9C0J8 1336 aaKnown RBP8.77□□□□□ -1.01
PPP4R1-216ENST00000580283 F6X3S4 739 aa8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 H0YIN7 160 aa8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 CYP19A1P11511 503 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 ZNF16P17020 682 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 GBP2P32456 591 aaPredicted RBP8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 LDHDQ86WU2 507 aa8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 RSRP1Q9BUV0 290 aa8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 DUSP23Q9BVJ7 150 aa8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 WNT10AQ9GZT5 417 aa8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 LTBP3Q9NS15 1303 aa8.76□□□□□ -1.01
PPP4R1-216ENST00000580283 LTBP1Q14766 1721 aa8.75□□□□□ -1.01
PPP4R1-216ENST00000580283 BPNT1O95861 308 aa8.75□□□□□ -1.01
PPP4R1-216ENST00000580283 CDK8P49336 464 aa8.75□□□□□ -1.01
PPP4R1-216ENST00000580283 MRPL58Q14197 206 aaKnown RBP8.75□□□□□ -1.01
PPP4R1-216ENST00000580283 ANGEL1Q9UNK9 670 aaKnown RBP8.75□□□□□ -1.01
PPP4R1-216ENST00000580283 LEFTY1O75610 366 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 WNT11O96014 354 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 MAP2K1Q02750 393 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 LMNB2Q03252 620 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 CAMK2GQ13555 558 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 MSMPQ1L6U9 139 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 ZNF530Q6P9A1 599 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 UBE3DQ7Z6J8 389 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 CCDC84Q86UT8 332 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 ZNF622Q969S3 477 aaKnown RBP eCLIP8.74□□□□□ -1.013e-8■□□□□ 10.5
PPP4R1-216ENST00000580283 TMEM74Q96NL1 305 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 PSMG3-AS1Q96PY0 264 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 ZBTB1Q9Y2K1 713 aa8.74□□□□□ -1.01
PPP4R1-216ENST00000580283 COL15A1P39059 1388 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 UBR2Q8IWV8 1755 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 MINDY4BA8MYZ0 360 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 LRIG2O94898 1065 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 PF4P02776 101 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 GRK4P32298 578 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 MTHFSP49914 203 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 RPL6Q02878 288 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 PDE4BQ07343 736 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 PLEKHO1Q53GL0 409 aaPredicted RBP8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 ARMCX6Q7L4S7 300 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 HID1Q8IV36 788 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 CNTROBQ8N137 903 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 BSDC1Q9NW68 430 aaPredicted RBP8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 ZC3H7BQ9UGR2 993 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 TACC3Q9Y6A5 838 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 ZNF541Q9H0D2 1346 aa8.73□□□□□ -1.01
PPP4R1-216ENST00000580283 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 SNAP47Q5SQN1 464 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 CST9Q5W186 159 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 TBC1D9BQ66K14 1250 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 PRR5LQ6MZQ0 368 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 BNC2Q6ZN30 1099 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 BRIP1Q9BX63 1249 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 MCOLN1Q9GZU1 580 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 TAOK3Q9H2K8 898 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 GTF2IRD1Q9UHL9 959 aa8.72□□□□□ -1.01
PPP4R1-216ENST00000580283 IQCA1LA6NCM1 817 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 GFRA2O00451 464 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 PGRP06401 933 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 CYP4F22Q6NT55 531 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 OLFM4Q6UX06 510 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 VSIG10LQ86VR7 867 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 FAM181AQ8N9Y4 354 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 TMEM87AQ8NBN3 555 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 CAPNS2Q96L46 248 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 FOXQ1Q9C009 403 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 FBRSQ9HAH7 460 aa8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 DDX21Q9NR30 783 aaKnown RBP eCLIP8.71□□□□□ -1.02
PPP4R1-216ENST00000580283 COL4A5P29400 1685 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 SCN7AQ01118 1682 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 SRGNP10124 158 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 EPHX2P34913 555 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 PDE6BP35913 854 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 FAM160A1Q05DH4 1040 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 HS2ST1Q7LGA3 356 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 GATAD2BQ8WXI9 593 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 RHOVQ96L33 236 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 GPR101Q96P66 508 aaPredicted RBP8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 KBTBD4Q9NVX7 518 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 GGT7Q9UJ14 662 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 HACL1Q9UJ83 578 aa8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 POLR2AP24928 1970 aaKnown RBP8.7□□□□□ -1.02
PPP4R1-216ENST00000580283 MKI67P46013 3256 aaKnown RBP8.69□□□□□ -1.02
PPP4R1-216ENST00000580283 RBM47A0AV96 593 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms