RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 H3BQV1 296 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 PIK3CDO00329 1044 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 CTGFP29279 349 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 CLK2P49760 499 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 RPS6P62753 249 aaKnown RBP18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 IFFO2Q5TF58 517 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 USP17L6PQ6QN14 398 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 RNF207Q6ZRF8 634 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 PLEKHH3Q7Z736 793 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 BLIDQ8IZY5 108 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 ANKRD35Q8N283 1001 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 BICD2Q8TD16 824 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 MMP19Q99542 508 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 CYP39A1Q9NYL5 469 aa18.25■□□□□ 0.51
CSNK1D-212ENST00000580061 GCOM1H8Y6P7 765 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 M0R2N6 131 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 STRNO43815 780 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 POLR2MP0CAP2 368 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 FCER1AP12319 257 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 PTPREP23469 700 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 KRT2P35908 639 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 BAATQ14032 418 aaPredicted RBP18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 KCTD2Q14681 263 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 UBE2SQ16763 222 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 SLC30A10Q6XR72 485 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 ABRAQ8N0Z2 381 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 TSKSQ9UJT2 592 aa18.24■□□□□ 0.51
CSNK1D-212ENST00000580061 PFASO15067 1338 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 STX6O43752 255 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 ECM2O94769 699 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 PDIA4P13667 645 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 DDIT3P35638 169 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 GRB14Q14449 540 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 SAFBQ15424 915 aaKnown RBP eCLIP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 DIS3L2Q8IYB7 885 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 REXO1Q8N1G1 1221 aaKnown RBP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 OXER1Q8TDS5 423 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 SYTL5Q8TDW5 730 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 BRMS1Q9HCU9 246 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 COL20A1Q9P218 1284 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 BIN2Q9UBW5 565 aaPredicted RBP18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
CSNK1D-212ENST00000580061 MYH7BA7E2Y1 1941 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 DNAJC25-GNG10A0A024R161 153 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 VPS37CA5D8V6 355 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 BTBD18B2RXH4 712 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 TNPO2O14787 897 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 FKTNO75072 461 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 PSMC4P43686 418 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 FCGRTP55899 365 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 RASGRP4Q8TDF6 673 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 ZNF296Q8WUU4 475 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 TRIM47Q96LD4 638 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 ARHGAP39Q9C0H5 1083 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 TMEM260Q9NX78 707 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 PCDHA6Q9UN73 950 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 PCDHA8Q9Y5H6 950 aa18.22■□□□□ 0.51
CSNK1D-212ENST00000580061 SLC15A5A6NIM6 579 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 ADORA2AP29274 412 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 CAP1Q01518 475 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 NR5A1Q13285 461 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 AP3B2Q13367 1082 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 KIF22Q14807 665 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 MORN1Q5T089 497 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 JAKMIP3Q5VZ66 844 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 MCTP2Q6DN12 878 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 CD99L2Q8TCZ2 262 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 TNFRSF25Q93038 417 aa18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 PURBQ96QR8 312 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 FOXP1Q9H334 677 aaPredicted RBP18.21■□□□□ 0.51
CSNK1D-212ENST00000580061 SPDYE3A6NKU9 549 aa18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 POTEB2H3BUK9 544 aa18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 FOSP01100 380 aaPredicted RBP18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 PGK2P07205 417 aa18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 PKP1Q13835 747 aa18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 FCHSD1Q86WN1 690 aa18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 ERO1AQ96HE7 468 aa18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 CASP8AP2Q9UKL3 1982 aa18.2■□□□□ 0.5
CSNK1D-212ENST00000580061 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 KIF28PB7ZC32 967 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 COBLO75128 1261 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 U2AF2P26368 475 aaKnown RBP eCLIP18.19■□□□□ 0.59e-9■■■■■ 27.8
CSNK1D-212ENST00000580061 CNTN2Q02246 1040 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 MCTP1Q6DN14 999 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 SOCS4Q8WXH5 440 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 USP6NLQ92738 828 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 PGBD1Q96JS3 809 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 TAAR1Q96RJ0 339 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 ANO3Q9BYT9 981 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 GJD2Q9UKL4 321 aa18.19■□□□□ 0.5
CSNK1D-212ENST00000580061 LRRC37A2A6NM11 1700 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 SOWAHBA6NEL2 793 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 MAP2K5Q13163 448 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 GNL2Q13823 731 aaKnown RBP18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 ZNF792Q3KQV3 632 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 EARS2Q5JPH6 523 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms