RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SV2BQ7L1I2 683 aa4.37□□□□□ -1.71
KPNB1-208ENST00000580019 GLCCI1Q86VQ1 547 aa4.37□□□□□ -1.71
KPNB1-208ENST00000580019 CCDC74BQ96LY2 380 aa4.37□□□□□ -1.71
KPNB1-208ENST00000580019 WWC2-AS2Q96NR7 200 aa4.37□□□□□ -1.71
KPNB1-208ENST00000580019 TGIF2Q9GZN2 237 aa4.37□□□□□ -1.71
KPNB1-208ENST00000580019 METTL5Q9NRN9 209 aaKnown RBP4.37□□□□□ -1.71
KPNB1-208ENST00000580019 SBNO2Q9Y2G9 1366 aa4.37□□□□□ -1.71
KPNB1-208ENST00000580019 CLSTN1O94985 981 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 ITGB6P18564 788 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 PLCG1P19174 1290 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 IBSPP21815 317 aaPredicted RBP4.36□□□□□ -1.71
KPNB1-208ENST00000580019 RPS26P62854 115 aaKnown RBP4.36□□□□□ -1.71
KPNB1-208ENST00000580019 IGBP1P78318 339 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 SMAD4Q13485 552 aaKnown RBP4.36□□□□□ -1.71
KPNB1-208ENST00000580019 BICRALQ6AI39 1079 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 IGFL4Q6B9Z1 124 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 TMC3Q7Z5M5 1100 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 NT5DC4Q86YG4 428 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 FAM9AQ8IZU1 332 aaPredicted RBP4.36□□□□□ -1.71
KPNB1-208ENST00000580019 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 IGDCC4Q8TDY8 1250 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 CDADC1Q9BWV3 514 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 CCSER2Q9H7U1 834 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 METTL14Q9HCE5 456 aaKnown RBP4.36□□□□□ -1.71
KPNB1-208ENST00000580019 MRS2Q9HD23 443 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.36□□□□□ -1.71
KPNB1-208ENST00000580019 CUX2O14529 1486 aa4.36□□□□□ -1.71
KPNB1-208ENST00000580019 PATE3B3GLJ2 98 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 ZNF623O75123 536 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 PMLP29590 882 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 RNF4P78317 190 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 RAD51AP2Q09MP3 1159 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 CCDC144BQ3MJ40 725 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 TMEM201Q5SNT2 666 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 SDE2Q6IQ49 451 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 CPA5Q8WXQ8 436 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 RNF34Q969K3 372 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 ZNF503Q96F45 646 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 PSMD1Q99460 953 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 ANTXR1Q9H6X2 564 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 CAPN10Q9HC96 672 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 PCDHB5Q9Y5E4 795 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 CC2D2AQ9P2K1 1620 aa4.35□□□□□ -1.71
KPNB1-208ENST00000580019 NARSO43776 548 aaKnown RBP4.34□□□□□ -1.71
KPNB1-208ENST00000580019 RPL6Q02878 288 aaKnown RBP4.34□□□□□ -1.71
KPNB1-208ENST00000580019 RBL2Q08999 1139 aa4.34□□□□□ -1.71
KPNB1-208ENST00000580019 EGFLAMQ63HQ2 1017 aa4.34□□□□□ -1.71
KPNB1-208ENST00000580019 MCTP2Q6DN12 878 aa4.34□□□□□ -1.71
KPNB1-208ENST00000580019 RNF207Q6ZRF8 634 aa4.34□□□□□ -1.71
KPNB1-208ENST00000580019 PHACTR4Q8IZ21 702 aa4.34□□□□□ -1.71
KPNB1-208ENST00000580019 TXNDC5Q8NBS9 432 aaKnown RBP4.34□□□□□ -1.71
KPNB1-208ENST00000580019 MICAL1Q8TDZ2 1067 aa4.34□□□□□ -1.71
KPNB1-208ENST00000580019 LCORQ96JN0 433 aaPredicted RBP4.34□□□□□ -1.71
KPNB1-208ENST00000580019 TINF2Q9BSI4 451 aa4.34□□□□□ -1.71
KPNB1-208ENST00000580019 hCG_2014768A0A024R1R8 64 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 SORBS3O60504 671 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 B4GALT3O60512 393 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 RAB11FIP3O75154 756 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 PRPF40AO75400 957 aaKnown RBP4.33□□□□□ -1.72
KPNB1-208ENST00000580019 PRAMEF1O95521 474 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 P4HBP07237 508 aaKnown RBP4.33□□□□□ -1.72
KPNB1-208ENST00000580019 ACRP10323 421 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 THBS2P35442 1172 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 CACNB2Q08289 660 aaPredicted RBP4.33□□□□□ -1.72
KPNB1-208ENST00000580019 LDLRAD1Q5T700 205 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 CCDC181Q5TID7 509 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 METTL16Q86W50 562 aaKnown RBP4.33□□□□□ -1.72
KPNB1-208ENST00000580019 GMLQ99445 158 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 RBCK1Q9BYM8 510 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 CSRNP2Q9H175 543 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 PDLIM7Q9NR12 457 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 CORINQ9Y5Q5 1042 aa4.33□□□□□ -1.72
KPNB1-208ENST00000580019 PNMA6FA0A0J9YX94 578 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 PLEKHD1A6NEE1 506 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 GIPC1O14908 333 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 ZNF205O95201 554 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 ERBB2P04626 1255 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 LDHBP07195 334 aaKnown RBP4.32□□□□□ -1.72
KPNB1-208ENST00000580019 EPHB4P54760 987 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 ARID5AQ03989 594 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 PTPROQ16827 1216 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 NBPF9Q3BBW0 867 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 VPS37DQ86XT2 251 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 JAMLQ86YT9 394 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 TMEM52Q8NDY8 209 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 ZCRB1Q8TBF4 217 aaKnown RBP4.32□□□□□ -1.72
KPNB1-208ENST00000580019 PMFBP1Q8TBY8 1022 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 TSPAN17Q96FV3 270 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 MIR1-1HGQ9H1L0 117 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 ZSWIM4Q9H7M6 989 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 PARP2Q9UGN5 583 aa4.32□□□□□ -1.72
KPNB1-208ENST00000580019 TREHO43280 583 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 SIGLEC6O43699 453 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 FBLP22087 321 aaKnown RBP4.31□□□□□ -1.72
KPNB1-208ENST00000580019 DNAJA1P31689 397 aaKnown RBP4.31□□□□□ -1.72
KPNB1-208ENST00000580019 ZNF76P36508 570 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 ANAPC15P60006 121 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 ATP2B2Q01814 1243 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 CCDC142Q17RM4 750 aa4.31□□□□□ -1.72
KPNB1-208ENST00000580019 NRN1LQ496H8 165 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms