RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 ZNF654Q8IZM8 581 aa30.46■■■□□ 2.47
LIMD2-208ENST00000579814 CTCFLQ8NI51 663 aaPredicted RBP30.46■■■□□ 2.47
LIMD2-208ENST00000579814 NEK1Q96PY6 1258 aa30.46■■■□□ 2.47
LIMD2-208ENST00000579814 MOXD2PA6NHM9 499 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 ADCY6O43306 1168 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 LIFRP42702 1097 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 PDE4DQ08499 809 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 KCNA10Q16322 511 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 TAPT1Q6NXT6 567 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 HOMER1Q86YM7 354 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 PCSK9Q8NBP7 692 aaKnown RBP30.45■■■□□ 2.47
LIMD2-208ENST00000579814 TBC1D5Q92609 795 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 UPF3AQ9H1J1 476 aaKnown RBP30.45■■■□□ 2.47
LIMD2-208ENST00000579814 PDGFCQ9NRA1 345 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 ATP11BQ9Y2G3 1177 aa30.45■■■□□ 2.47
LIMD2-208ENST00000579814 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.44■■■□□ 2.46
LIMD2-208ENST00000579814 CST5P28325 142 aaPredicted RBP30.44■■■□□ 2.46
LIMD2-208ENST00000579814 ACLYP53396 1101 aa30.44■■■□□ 2.46
LIMD2-208ENST00000579814 TSGA10IPQ3SY00 556 aa30.44■■■□□ 2.46
LIMD2-208ENST00000579814 GNASQ5JWF2 1037 aa30.44■■■□□ 2.46
LIMD2-208ENST00000579814 PIGSQ96S52 555 aa30.44■■■□□ 2.46
LIMD2-208ENST00000579814 PCDHA1Q9Y5I3 950 aa30.44■■■□□ 2.46
LIMD2-208ENST00000579814 A0A1W2PQ45 241 aaPredicted RBP30.43■■■□□ 2.46
LIMD2-208ENST00000579814 A0A1W2PQY0 241 aa30.43■■■□□ 2.46
LIMD2-208ENST00000579814 KRT32Q14532 448 aa30.43■■■□□ 2.46
LIMD2-208ENST00000579814 SNX17Q15036 470 aa30.43■■■□□ 2.46
LIMD2-208ENST00000579814 C1orf53Q5VUE5 145 aa30.43■■■□□ 2.46
LIMD2-208ENST00000579814 CCSAPQ6IQ19 270 aaPredicted RBP30.43■■■□□ 2.46
LIMD2-208ENST00000579814 SYTL5Q8TDW5 730 aaPredicted RBP30.43■■■□□ 2.46
LIMD2-208ENST00000579814 AP5M1Q9H0R1 490 aa30.43■■■□□ 2.46
LIMD2-208ENST00000579814 RBM27Q9P2N5 1060 aaKnown RBP30.43■■■□□ 2.46
LIMD2-208ENST00000579814 GNEQ9Y223 722 aaKnown RBP30.43■■■□□ 2.46
LIMD2-208ENST00000579814 SMCHD1A6NHR9 2005 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 PNMA6FA0A0J9YX94 578 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 MYADML2A6NDP7 307 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 CALM1P0DP23 149 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 CALM2P0DP24 149 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 CALM3P0DP25 149 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 SMPD1P17405 629 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 GNAQP50148 359 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 SLC35G1Q2M3R5 365 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 LZTS2Q9BRK4 669 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 MYL10Q9BUA6 226 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 PRKAG2Q9UGJ0 569 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 SLC12A7Q9Y666 1083 aa30.42■■■□□ 2.46
LIMD2-208ENST00000579814 DYNC1LI2O43237 492 aaPredicted RBP30.41■■■□□ 2.46
LIMD2-208ENST00000579814 CYTH3O43739 400 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 EDNRBP24530 442 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 NKX3-2P78367 333 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 COL9A3Q14050 684 aaPredicted RBP30.41■■■□□ 2.46
LIMD2-208ENST00000579814 RASEFQ8IZ41 740 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 NSUN6Q8TEA1 469 aaKnown RBP30.41■■■□□ 2.46
LIMD2-208ENST00000579814 LRRC2Q9BYS8 371 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 PRO3102Q9H379 93 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 STARD7Q9NQZ5 370 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 Q9Y3F1 56 aa30.41■■■□□ 2.46
LIMD2-208ENST00000579814 PPP1R11O60927 126 aaPredicted RBP30.4■■■□□ 2.46
LIMD2-208ENST00000579814 CFBP00751 764 aa30.4■■■□□ 2.46
LIMD2-208ENST00000579814 SMARCA1P28370 1054 aa30.4■■■□□ 2.46
LIMD2-208ENST00000579814 TRIM60Q495X7 471 aa30.4■■■□□ 2.46
LIMD2-208ENST00000579814 DHX32Q7L7V1 743 aaKnown RBP30.4■■■□□ 2.46
LIMD2-208ENST00000579814 TLK2Q86UE8 772 aa30.4■■■□□ 2.46
LIMD2-208ENST00000579814 GLT1D1Q96MS3 346 aa30.4■■■□□ 2.46
LIMD2-208ENST00000579814 TAAR1Q96RJ0 339 aa30.4■■■□□ 2.46
LIMD2-208ENST00000579814 GDF15Q99988 308 aa30.4■■■□□ 2.46
LIMD2-208ENST00000579814 MAP3K20Q9NYL2 800 aaKnown RBP30.4■■■□□ 2.46
LIMD2-208ENST00000579814 FRMPD3Q5JV73 1810 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 REC8O95072 547 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 ASGR1P07306 291 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 IRX5P78411 483 aaPredicted RBP30.39■■■□□ 2.46
LIMD2-208ENST00000579814 SYNE3Q6ZMZ3 975 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 SAMD3Q8N6K7 520 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 VTI1AQ96AJ9 217 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 RMDN3Q96TC7 470 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 WDR11Q9BZH6 1224 aa30.39■■■□□ 2.46
LIMD2-208ENST00000579814 RBM47A0AV96 593 aaKnown RBP30.38■■■□□ 2.45
LIMD2-208ENST00000579814 HMGB1P09429 215 aaKnown RBP30.38■■■□□ 2.45
LIMD2-208ENST00000579814 MAGEA10P43363 369 aaPredicted RBP30.38■■■□□ 2.45
LIMD2-208ENST00000579814 DUSP28Q4G0W2 176 aa30.38■■■□□ 2.45
LIMD2-208ENST00000579814 SGMS1Q86VZ5 419 aa30.38■■■□□ 2.45
LIMD2-208ENST00000579814 RRP36Q96EU6 259 aaKnown RBP30.38■■■□□ 2.45
LIMD2-208ENST00000579814 IWS1Q96ST2 819 aa30.38■■■□□ 2.45
LIMD2-208ENST00000579814 SPZ1Q9BXG8 430 aa30.38■■■□□ 2.45
LIMD2-208ENST00000579814 COL20A1Q9P218 1284 aa30.38■■■□□ 2.45
LIMD2-208ENST00000579814 CTAGE5O15320 804 aa30.37■■■□□ 2.45
LIMD2-208ENST00000579814 ZEB2O60315 1214 aa30.37■■■□□ 2.45
LIMD2-208ENST00000579814 BMP8BP34820 402 aa30.37■■■□□ 2.45
LIMD2-208ENST00000579814 EXOSC10Q01780 885 aaKnown RBP30.37■■■□□ 2.45
LIMD2-208ENST00000579814 FSCN1Q16658 493 aaKnown RBP30.37■■■□□ 2.45
LIMD2-208ENST00000579814 ARHGEF16Q5VV41 709 aa30.37■■■□□ 2.45
LIMD2-208ENST00000579814 PIBF1Q8WXW3 757 aa30.37■■■□□ 2.45
LIMD2-208ENST00000579814 LBHD1Q9BQE6 289 aaPredicted RBP30.37■■■□□ 2.45
LIMD2-208ENST00000579814 ELP1O95163 1332 aa30.37■■■□□ 2.45
LIMD2-208ENST00000579814 HSD17B4P51659 736 aa30.36■■■□□ 2.45
LIMD2-208ENST00000579814 BEX3Q00994 111 aa30.36■■■□□ 2.45
LIMD2-208ENST00000579814 GHRHRQ02643 423 aa30.36■■■□□ 2.45
LIMD2-208ENST00000579814 TLE2Q04725 743 aa30.36■■■□□ 2.45
LIMD2-208ENST00000579814 ADCK5Q3MIX3 580 aa30.36■■■□□ 2.45
LIMD2-208ENST00000579814 SCFD2Q8WU76 684 aa30.36■■■□□ 2.45
LIMD2-208ENST00000579814 A0A1W2PPC1 479 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms