RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 FOXP2O15409 715 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 RANBP6O60518 1105 aaKnown RBP10.11□□□□□ -0.79
CASC3-206ENST00000579238 NMT2O60551 498 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 ATP2A2P16615 1042 aaKnown RBP10.11□□□□□ -0.79
CASC3-206ENST00000579238 ALDH5A1P51649 535 aaPredicted RBP10.11□□□□□ -0.79
CASC3-206ENST00000579238 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 BAATQ14032 418 aaPredicted RBP10.11□□□□□ -0.79
CASC3-206ENST00000579238 CCDC96Q2M329 555 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 BTNL9Q6UXG8 535 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 RASGRP2Q7LDG7 609 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 SCLYQ96I15 445 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
CASC3-206ENST00000579238 UHRF1Q96T88 793 aaPredicted RBP10.11□□□□□ -0.79
CASC3-206ENST00000579238 WDR11Q9BZH6 1224 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 INCENPQ9NQS7 918 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 ANAPC4Q9UJX5 808 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 MTMR7Q9Y216 660 aa10.11□□□□□ -0.79
CASC3-206ENST00000579238 TNKSO95271 1327 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 RBM47A0AV96 593 aaKnown RBP10.1□□□□□ -0.79
CASC3-206ENST00000579238 NFIBO00712 420 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 ORC4O43929 436 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 CYP2C9P11712 490 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 MYOGP15173 224 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 CPT1AP50416 773 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 PURAQ00577 322 aaKnown RBP10.1□□□□□ -0.79
CASC3-206ENST00000579238 TTLL4Q14679 1199 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 SYDE2Q5VT97 1194 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 TTBK2Q6IQ55 1244 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 OR6J1Q8NGC5 347 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 OTUD7AQ8TE49 926 aaPredicted RBP10.1□□□□□ -0.79
CASC3-206ENST00000579238 MTG1Q9BT17 334 aaPredicted RBP10.1□□□□□ -0.79
CASC3-206ENST00000579238 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
CASC3-206ENST00000579238 TRMT13Q9NUP7 481 aaKnown RBP10.1□□□□□ -0.79
CASC3-206ENST00000579238 PNMA2Q9UL42 364 aa10.1□□□□□ -0.79
CASC3-206ENST00000579238 CHD7Q9P2D1 2997 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 GBF1Q92538 1859 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 PTPDC1A2A3K4 754 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 NKRFO15226 690 aaKnown RBP eCLIP10.09□□□□□ -0.79
CASC3-206ENST00000579238 KPNA6O60684 536 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 MYL3P08590 195 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 FGRP09769 529 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 TOP1P11387 765 aaKnown RBP10.09□□□□□ -0.79
CASC3-206ENST00000579238 ACTN1P12814 892 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 POU3F3P20264 500 aaPredicted RBP10.09□□□□□ -0.79
CASC3-206ENST00000579238 MX1P20591 662 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 RFC2P35250 354 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 SLC16A2P36021 539 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 ALX1Q15699 326 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 AAK1Q2M2I8 961 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 BRDTQ58F21 947 aaPredicted RBP10.09□□□□□ -0.79
CASC3-206ENST00000579238 TMEM67Q5HYA8 995 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 CLEC4DQ8WXI8 215 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 CHD9Q3L8U1 2897 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 LCTP09848 1927 aa10.09□□□□□ -0.79
CASC3-206ENST00000579238 RAD50Q92878 1312 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 GTPBP6O43824 516 aaPredicted RBP10.08□□□□□ -0.8
CASC3-206ENST00000579238 BMP1P13497 986 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 EDNRBP24530 442 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 CALML3P27482 149 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 PDE4DQ08499 809 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 PPP2R5BQ15173 497 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 NBPF20Q3BBV1 942 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 VPS53Q5VIR6 699 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 NFRKBQ6P4R8 1299 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 SLC30A10Q6XR72 485 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 RNF207Q6ZRF8 634 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 DEFB128Q7Z7B8 93 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 RETREG2Q8NC44 543 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 DNERQ8NFT8 737 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 PHOSPHO2Q8TCD6 241 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 SCFD2Q8WU76 684 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 SLC9A7Q96T83 725 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 MPHOSPH6Q99547 160 aaKnown RBP10.08□□□□□ -0.8
CASC3-206ENST00000579238 TMEM47Q9BQJ4 181 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 TCP11L1Q9NUJ3 509 aa10.08□□□□□ -0.8
CASC3-206ENST00000579238 FRMPD2Q68DX3 1309 aaPredicted RBP10.07□□□□□ -0.8
CASC3-206ENST00000579238 SCN10AQ9Y5Y9 1956 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 A6NJR5 290 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 CA3P07451 260 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 IQCF3P0C7M6 154 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 PDHBP11177 359 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 RPS6P62753 249 aaKnown RBP10.07□□□□□ -0.8
CASC3-206ENST00000579238 PTPN11Q06124 597 aaPredicted RBP10.07□□□□□ -0.8
CASC3-206ENST00000579238 BFSP2Q13515 415 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 SKIV2LQ15477 1246 aaKnown RBP10.07□□□□□ -0.8
CASC3-206ENST00000579238 RRP12Q5JTH9 1297 aaKnown RBP10.07□□□□□ -0.8
CASC3-206ENST00000579238 EVI5LQ96CN4 794 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 HELLSQ9NRZ9 838 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 TOMM22Q9NS69 142 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 PCDHB15Q9Y5E8 787 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 MTCH2Q9Y6C9 303 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 NCOR1O75376 2440 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 WDR19Q8NEZ3 1342 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
CASC3-206ENST00000579238 B4DLN1 442 aa10.06□□□□□ -0.8
CASC3-206ENST00000579238 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms