RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 TNKSO95271 1327 aa20.51■□□□□ 0.87
SLC9A3R1-203ENST00000578958 TIMP1P01033 207 aa20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PARP1P09874 1014 aaKnown RBP20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 CDK7P50613 346 aa20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ASPRV1Q53RT3 343 aa20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 IFIT1BQ5T764 474 aaKnown RBP20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 SLC30A10Q6XR72 485 aa20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 CLEC4DQ8WXI8 215 aa20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 Q9Y3F1 56 aa20.5■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PDE4AP27815 886 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 RPS6P62753 249 aaKnown RBP20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 NKX3-2P78367 333 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 CDC37Q16543 378 aaPredicted RBP20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 FAM109BQ6ICB4 259 aaPredicted RBP20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ENAHQ8N8S7 591 aaPredicted RBP20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 MORC4Q8TE76 937 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ANKS1AQ92625 1134 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 FAM161BQ96MY7 647 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 WDR11Q9BZH6 1224 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 CPVLQ9H3G5 476 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 STXBP5LQ9Y2K9 1186 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 RAD50Q92878 1312 aa20.49■□□□□ 0.87
SLC9A3R1-203ENST00000578958 CTAGE5O15320 804 aa20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 GSPT1P15170 499 aaKnown RBP20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 DUSP28Q4G0W2 176 aa20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 BRDTQ58F21 947 aaPredicted RBP20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 TMEM199Q8N511 208 aa20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 DNERQ8NFT8 737 aa20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 VAT1LQ9HCJ6 419 aa20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 GPHNQ9NQX3 736 aaPredicted RBP20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 U3KPZ7 1027 aaPredicted RBP20.48■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PPIGQ13427 754 aaKnown RBP eCLIP20.47■□□□□ 0.878e-13■■□□□ 12.2
SLC9A3R1-203ENST00000578958 ITGA7Q13683 1181 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 MFSD5Q6N075 450 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ADGRF4Q8IZF3 695 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 SEZ6LQ9BYH1 1024 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PPP1R12CQ9BZL4 782 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 TBX21Q9UL17 535 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ABCB11O95342 1321 aa20.47■□□□□ 0.87
SLC9A3R1-203ENST00000578958 LAMA4Q16363 1823 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 ERICH2A1L162 156 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PTGS1P23219 599 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 CPT1AP50416 773 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 SMAD3P84022 425 aaKnown RBP20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 PPP2R5BQ15173 497 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 FAM126BQ8IXS8 530 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 RGS22Q8NE09 1264 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 OR6J1Q8NGC5 347 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 POLR3EQ9NVU0 708 aa20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 MRPL11Q9Y3B7 192 aaKnown RBP20.46■□□□□ 0.87
SLC9A3R1-203ENST00000578958 MYL3P08590 195 aa20.45■□□□□ 0.86
SLC9A3R1-203ENST00000578958 EPHB4P54760 987 aa20.45■□□□□ 0.86
SLC9A3R1-203ENST00000578958 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
SLC9A3R1-203ENST00000578958 RALYLQ86SE5 291 aaKnown RBP20.45■□□□□ 0.86
SLC9A3R1-203ENST00000578958 FBXO11Q86XK2 927 aa20.45■□□□□ 0.86
SLC9A3R1-203ENST00000578958 NKRFO15226 690 aaKnown RBP eCLIP20.44■□□□□ 0.868e-10■■■■□ 23.8
SLC9A3R1-203ENST00000578958 CHMLP26374 656 aa20.44■□□□□ 0.86
SLC9A3R1-203ENST00000578958 SCFD2Q8WU76 684 aa20.44■□□□□ 0.86
SLC9A3R1-203ENST00000578958 MAF1Q9H063 256 aa20.44■□□□□ 0.86
SLC9A3R1-203ENST00000578958 IL25Q9H293 177 aa20.44■□□□□ 0.86
SLC9A3R1-203ENST00000578958 LAMA2P24043 3122 aaKnown RBP20.43■□□□□ 0.86
SLC9A3R1-203ENST00000578958 PSMC6P62333 389 aa20.43■□□□□ 0.86
SLC9A3R1-203ENST00000578958 SART3Q15020 963 aaKnown RBP20.43■□□□□ 0.86
SLC9A3R1-203ENST00000578958 QRICH1Q2TAL8 776 aa20.43■□□□□ 0.86
SLC9A3R1-203ENST00000578958 HIPK3Q9H422 1215 aa20.43■□□□□ 0.86
SLC9A3R1-203ENST00000578958 LRRC37A2A6NM11 1700 aa20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 RBM47A0AV96 593 aaKnown RBP20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 KLRF2D3W0D1 207 aa20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 IFIT3O14879 490 aaKnown RBP20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 CD4P01730 458 aa20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 TXNP10599 105 aaKnown RBP20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 CSF2RAP15509 400 aa20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 TTLL4Q14679 1199 aa20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 SLC43A3Q8NBI5 491 aa20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 NSUN6Q8TEA1 469 aaKnown RBP20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 JMJD4Q9H9V9 463 aa20.42■□□□□ 0.86
SLC9A3R1-203ENST00000578958 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 EDNRBP24530 442 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 CYP2C18P33260 490 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 PTH1RQ03431 593 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 ARHGEF16Q5VV41 709 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 PSRC1Q6PGN9 363 aaPredicted RBP20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 CYB5R4Q7L1T6 521 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 NCOA7Q8NI08 942 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 RMDN3Q96TC7 470 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.41■□□□□ 0.862e-8■□□□□ 9.2
SLC9A3R1-203ENST00000578958 MTG1Q9BT17 334 aaPredicted RBP20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 AMNQ9BXJ7 453 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 TRPV6Q9H1D0 765 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 SEMA6BQ9H3T3 888 aa20.41■□□□□ 0.86
SLC9A3R1-203ENST00000578958 COL6A3P12111 3177 aa20.4■□□□□ 0.86
SLC9A3R1-203ENST00000578958 KPNA6O60684 536 aa20.4■□□□□ 0.86
SLC9A3R1-203ENST00000578958 CFBP00751 764 aa20.4■□□□□ 0.86
SLC9A3R1-203ENST00000578958 CYP21A2P08686 494 aa20.4■□□□□ 0.86
SLC9A3R1-203ENST00000578958 LCTP09848 1927 aa20.4■□□□□ 0.86
SLC9A3R1-203ENST00000578958 SUPT20HL2P0C7V6 817 aa20.4■□□□□ 0.86
SLC9A3R1-203ENST00000578958 STXBP2Q15833 593 aa20.4■□□□□ 0.86
SLC9A3R1-203ENST00000578958 FAM47CQ5HY64 1035 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms