RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 SULF1Q8IWU6 871 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 KLRG1Q96E93 195 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 FEM1BQ9UK73 627 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 SMCHD1A6NHR9 2005 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 TDP2O95551 362 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 PTPRAP18433 802 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 DHX58Q96C10 678 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 TANGO6Q9C0B7 1094 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 GINM1Q9NU53 330 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 KIAA1468Q9P260 1216 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 PITPNM2Q9BZ72 1349 aa22.91■■□□□ 1.26
SMG8-203ENST00000578922 EDIL3O43854 480 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 ARL6IP4Q66PJ3 421 aaKnown RBP22.9■■□□□ 1.26
SMG8-203ENST00000578922 DTHD1Q6ZMT9 781 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 FAM160B2Q86V87 743 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 POTEDQ86YR6 584 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 ZHX2Q9Y6X8 837 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 MEIS2O14770 477 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 HOXA13P31271 388 aaPredicted RBP22.9■■□□□ 1.26
SMG8-203ENST00000578922 ISM2Q6H9L7 571 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 GRAMD1CQ8IYS0 662 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 MRFAP1L1Q96HT8 127 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 RANBP17Q9H2T7 1088 aaKnown RBP22.9■■□□□ 1.26
SMG8-203ENST00000578922 EMILIN3Q9NT22 766 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 ANO10Q9NW15 660 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 DOCK1Q14185 1865 aa22.9■■□□□ 1.26
SMG8-203ENST00000578922 KRT26Q7Z3Y9 468 aa22.89■■□□□ 1.26
SMG8-203ENST00000578922 P2RX7Q99572 595 aaKnown RBP22.89■■□□□ 1.26
SMG8-203ENST00000578922 PP2D1A8MPX8 630 aa22.89■■□□□ 1.25
SMG8-203ENST00000578922 OPLAHO14841 1288 aa22.89■■□□□ 1.25
SMG8-203ENST00000578922 WDR46O15213 610 aaKnown RBP22.89■■□□□ 1.25
SMG8-203ENST00000578922 SLC37A4O43826 429 aa22.89■■□□□ 1.25
SMG8-203ENST00000578922 OR52Z1P0C646 297 aa22.89■■□□□ 1.25
SMG8-203ENST00000578922 C11orf57Q6ZUT1 292 aaPredicted RBP22.89■■□□□ 1.25
SMG8-203ENST00000578922 LPAR1Q92633 364 aa22.89■■□□□ 1.25
SMG8-203ENST00000578922 USP2O75604 605 aaPredicted RBP22.88■■□□□ 1.25
SMG8-203ENST00000578922 VCAM1P19320 739 aa22.88■■□□□ 1.25
SMG8-203ENST00000578922 EPHX2P34913 555 aa22.88■■□□□ 1.25
SMG8-203ENST00000578922 ZNF280CQ8ND82 737 aa22.88■■□□□ 1.25
SMG8-203ENST00000578922 GLT8D2Q9H1C3 349 aa22.88■■□□□ 1.25
SMG8-203ENST00000578922 ACTN4O43707 911 aaKnown RBP22.87■■□□□ 1.25
SMG8-203ENST00000578922 EAPPQ56P03 285 aaPredicted RBP22.87■■□□□ 1.25
SMG8-203ENST00000578922 ANO3Q9BYT9 981 aa22.87■■□□□ 1.25
SMG8-203ENST00000578922 PLA2G6O60733 806 aa22.87■■□□□ 1.25
SMG8-203ENST00000578922 LONP1P36776 959 aaKnown RBP22.87■■□□□ 1.25
SMG8-203ENST00000578922 ZRSR1Q15695 479 aaKnown RBP22.87■■□□□ 1.25
SMG8-203ENST00000578922 L3MBTL3Q96JM7 780 aaPredicted RBP22.87■■□□□ 1.25
SMG8-203ENST00000578922 UIMC1Q96RL1 719 aa22.87■■□□□ 1.25
SMG8-203ENST00000578922 SLF1Q9BQI6 1058 aa22.87■■□□□ 1.25
SMG8-203ENST00000578922 RPAP3Q9H6T3 665 aaPredicted RBP22.87■■□□□ 1.25
SMG8-203ENST00000578922 AS3MTQ9HBK9 375 aa22.87■■□□□ 1.25
SMG8-203ENST00000578922 FLOT1O75955 427 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 PRR29P0C7W0 189 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 HMGCS2P54868 508 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 BACE1P56817 501 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.86■■□□□ 1.25
SMG8-203ENST00000578922 TBC1D5Q92609 795 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 WDR18Q9BV38 432 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 LAD1O00515 517 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 CFBP00751 764 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 TXKP42681 527 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 CALCRLQ16602 461 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 AGBL1Q96MI9 1066 aa22.86■■□□□ 1.25
SMG8-203ENST00000578922 NAT10Q9H0A0 1025 aaKnown RBP22.86■■□□□ 1.25
SMG8-203ENST00000578922 MYH7BA7E2Y1 1941 aa22.85■■□□□ 1.25
SMG8-203ENST00000578922 GLTPD2A6NH11 291 aa22.85■■□□□ 1.25
SMG8-203ENST00000578922 TECP42680 631 aa22.85■■□□□ 1.25
SMG8-203ENST00000578922 USP14P54578 494 aa22.85■■□□□ 1.25
SMG8-203ENST00000578922 FCHSD1Q86WN1 690 aa22.85■■□□□ 1.25
SMG8-203ENST00000578922 LDHDQ86WU2 507 aa22.85■■□□□ 1.25
SMG8-203ENST00000578922 PRPF38AQ8NAV1 312 aaKnown RBP22.85■■□□□ 1.25
SMG8-203ENST00000578922 CCDC94Q9BW85 323 aaPredicted RBP22.85■■□□□ 1.25
SMG8-203ENST00000578922 BECN2A8MW95 431 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 PRPHP41219 470 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 AFMP43652 599 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 KARSQ15046 597 aaKnown RBP22.84■■□□□ 1.25
SMG8-203ENST00000578922 POSTNQ15063 836 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 CPXCR1Q8N123 301 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 GJA10Q969M2 543 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 PLIN2Q99541 437 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 DDX25Q9UHL0 483 aaKnown RBP22.84■■□□□ 1.25
SMG8-203ENST00000578922 NRBP1Q9UHY1 535 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 SPDYE3A6NKU9 549 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 CTIFO43310 598 aaKnown RBP22.84■■□□□ 1.25
SMG8-203ENST00000578922 MDM2Q00987 491 aaPredicted RBP22.84■■□□□ 1.25
SMG8-203ENST00000578922 VGLL4Q14135 290 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 DPCR1Q3MIW9 517 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 USP50Q70EL3 339 aaPredicted RBP22.84■■□□□ 1.25
SMG8-203ENST00000578922 CEP57L1Q8IYX8 460 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 ZNF710Q8N1W2 664 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 RASSF8Q8NHQ8 419 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 STAMQ92783 540 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 PCDHA5Q9Y5H7 936 aa22.84■■□□□ 1.25
SMG8-203ENST00000578922 RIOK3O14730 519 aaKnown RBP22.83■■□□□ 1.25
SMG8-203ENST00000578922 AP3B2Q13367 1082 aa22.83■■□□□ 1.25
SMG8-203ENST00000578922 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.83■■□□□ 1.25
SMG8-203ENST00000578922 CCPG1Q9ULG6 757 aa22.83■■□□□ 1.25
SMG8-203ENST00000578922 CASP1P29466 404 aa22.83■■□□□ 1.24
SMG8-203ENST00000578922 TXLNAP40222 546 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms