RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 TRANK1O15050 2925 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 GSG1L2A8MUP6 293 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 PRDM1O75626 825 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 ARHGEF15O94989 841 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 KCNJ6P48051 423 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 CPT1AP50416 773 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 DUSP28Q4G0W2 176 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 CHMP4CQ96CF2 233 aa10.85□□□□□ -0.67
PTPRM-210ENST00000578916 MTG1Q9BT17 334 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-210ENST00000578916 PRR33A8MZF0 331 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 LPXNO60711 386 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 BAIAP3O94812 1187 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 IQCF3P0C7M6 154 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 TSPY3P0CV98 308 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 TSPY8P0CW00 308 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 SLC1A4P43007 532 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 TDO2P48775 406 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
PTPRM-210ENST00000578916 BFSP2Q13515 415 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 NBPF20Q3BBV1 942 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 BRDTQ58F21 947 aaPredicted RBP10.84□□□□□ -0.67
PTPRM-210ENST00000578916 MUM1L1Q5H9M0 696 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 NSMFQ6X4W1 530 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 WDR11Q9BZH6 1224 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 CD320Q9NPF0 282 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 CYP39A1Q9NYL5 469 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 LMCD1Q9NZU5 365 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 PRRC2BQ5JSZ5 2229 aaKnown RBP10.84□□□□□ -0.67
PTPRM-210ENST00000578916 LRRC37A2A6NM11 1700 aa10.84□□□□□ -0.67
PTPRM-210ENST00000578916 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 APPP05067 770 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 MCCP23508 829 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-210ENST00000578916 SNAP25P60880 206 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 NFRKBQ6P4R8 1299 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 GJD3Q8N144 294 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 OR6J1Q8NGC5 347 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 NEDD1Q8NHV4 660 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 PANK1Q8TE04 598 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 MORC4Q8TE76 937 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 GDPD5Q8WTR4 605 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 GMCL1Q96IK5 515 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 PURBQ96QR8 312 aaKnown RBP10.83□□□□□ -0.68
PTPRM-210ENST00000578916 UIMC1Q96RL1 719 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 ZBED2Q9BTP6 218 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 TSHZ2Q9NRE2 1034 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 ADD3Q9UEY8 706 aaKnown RBP10.83□□□□□ -0.68
PTPRM-210ENST00000578916 MCM3APO60318 1980 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 RAD50Q92878 1312 aa10.83□□□□□ -0.68
PTPRM-210ENST00000578916 GREB1LQ9C091 1923 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-210ENST00000578916 KPNA6O60684 536 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 PLA2G6O60733 806 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 GNAT2P19087 354 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 TFAP4Q01664 338 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 PTPN11Q06124 597 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-210ENST00000578916 PDE4BQ07343 736 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 BAATQ14032 418 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-210ENST00000578916 CSPP1Q1MSJ5 1256 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 KCTD1Q719H9 257 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 SPRED2Q7Z698 418 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 PPP1R13LQ8WUF5 828 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 UBE2ZQ9H832 354 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-210ENST00000578916 CCPG1Q9ULG6 757 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 PRR12Q9ULL5 1215 aa10.82□□□□□ -0.68
PTPRM-210ENST00000578916 LCHNA4D1U4 455 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 NKRFO15226 690 aaKnown RBP eCLIP10.81□□□□□ -0.68
PTPRM-210ENST00000578916 SLC3A2P08195 630 aaKnown RBP10.81□□□□□ -0.68
PTPRM-210ENST00000578916 ALADP13716 330 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 MRE11P49959 708 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 ALDH5A1P51649 535 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-210ENST00000578916 CHMP4BP1P59074 171 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 LRRFIP1Q32MZ4 808 aaKnown RBP10.81□□□□□ -0.68
PTPRM-210ENST00000578916 LEXMQ3ZCV2 418 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 RCSD1Q6JBY9 416 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 FAM178BQ8IXR5 827 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 CCDC155Q8N6L0 562 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 APPBP2Q92624 585 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 OSBP2Q969R2 916 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 EPB41L4AQ9HCS5 686 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-210ENST00000578916 MTUS1Q9ULD2 1270 aa10.81□□□□□ -0.68
PTPRM-210ENST00000578916 PLIN4Q96Q06 1357 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-210ENST00000578916 LOC102724159A0A0B4J2E5 919 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 RBM47A0AV96 593 aaKnown RBP10.8□□□□□ -0.68
PTPRM-210ENST00000578916 PTPDC1A2A3K4 754 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 PATL2C9JE40 543 aaKnown RBP10.8□□□□□ -0.68
PTPRM-210ENST00000578916 CCER2I3L3R5 266 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 RNF113AO15541 343 aaKnown RBP10.8□□□□□ -0.68
PTPRM-210ENST00000578916 GPAA1O43292 621 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 ICAM1P05362 532 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 KCNA5P22460 613 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 WDR5P61964 334 aaKnown RBP10.8□□□□□ -0.68
PTPRM-210ENST00000578916 PPP2R5BQ15173 497 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 PWP2Q15269 919 aaKnown RBP10.8□□□□□ -0.68
PTPRM-210ENST00000578916 PTGISQ16647 500 aa10.8□□□□□ -0.68
PTPRM-210ENST00000578916 TMCO2Q7Z6W1 182 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms