RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 SRSF3P84103 164 aaKnown RBP6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 OLFML2BQ68BL8 750 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 MBLAC2Q68D91 279 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 BICRALQ6AI39 1079 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 RPTNQ6XPR3 784 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 ATG14Q6ZNE5 492 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 FRS2Q8WU20 508 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 ARMC5Q96C12 935 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 TRIM55Q9BYV6 548 aa6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 MBD1Q9UIS9 605 aaPredicted RBP6.4□□□□□ -1.38
TRAPPC8-205ENST00000578658 A0A1W2PQJ5 194 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 A0A1W2PQU0 124 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 C7orf72A4D263 438 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 AGRPO00253 132 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 PPP1R11O60927 126 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 CYBBP04839 570 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 SNRPB2P08579 225 aaKnown RBP6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 JAG1P78504 1218 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 TMEM62Q0P6H9 643 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 NR1I3Q14994 352 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 SF1Q15637 639 aaKnown RBP6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 NBPF6Q5VWK0 638 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 TMEM132EQ6IEE7 984 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 ST13P5Q8NFI4 369 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 NBPF4Q96M43 638 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 CCDC140Q96MF4 163 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 MTA3Q9BTC8 594 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 SGPP1Q9BX95 441 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 FBLN5Q9UBX5 448 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 MSRB2Q9Y3D2 182 aa6.39□□□□□ -1.39
TRAPPC8-205ENST00000578658 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 NPHS1O60500 1241 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 GLI4P10075 376 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 GTF2F1P35269 517 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 MAPKAPK2P49137 400 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 GFRA1P56159 465 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 PPP2R2AP63151 447 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 TESK1Q15569 626 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 PLEKHN1Q494U1 663 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 PAQR3Q6TCH7 311 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 TMC6Q7Z403 805 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 KREMEN2Q8NCW0 462 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 CNTD2Q9H8S5 307 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 SIRT5Q9NXA8 310 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 GULP1Q9UBP9 304 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 SMG5Q9UPR3 1016 aaKnown RBP6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 RWDD3Q9Y3V2 267 aa6.38□□□□□ -1.39
TRAPPC8-205ENST00000578658 ARNTLO00327 626 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 CPP00450 1065 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 ECI1P42126 302 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 GRIA2P42262 883 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 RBM10P98175 930 aaKnown RBP6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 INF2Q27J81 1249 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 PRSS53Q2L4Q9 553 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 ACBD5Q5T8D3 534 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 E4F1Q66K89 784 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 IQCEQ6IPM2 695 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 ANKLE2Q86XL3 938 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 KRTAP1-3Q8IUG1 177 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 CCDC103Q8IW40 242 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 LZTR1Q8N653 840 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 TMEM145Q8NBT3 493 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 DPF3Q92784 378 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 C1orf159Q96HA4 380 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 TMEFF2Q9UIK5 374 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC8-205ENST00000578658 U2SURPO15042 1029 aaKnown RBP6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 RBL2Q08999 1139 aa6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 KCNA10Q16322 511 aa6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 DENND5AQ6IQ26 1287 aa6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 ZNF669Q96BR6 464 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 PPP1R1BQ9UD71 204 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC8-205ENST00000578658 IQCA1LA6NCM1 817 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 NPIPB6E9PJ23 425 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 N4BP3O15049 544 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 MEFVO15553 781 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 KCNJ6P48051 423 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 CDR1P51861 262 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 EPHB3P54753 998 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 LINC00310P59036 64 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 KCNAB2Q13303 367 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 SERINC3Q13530 473 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 SF3A1Q15459 793 aaKnown RBP6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 SLC35F1Q5T1Q4 408 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 ZC3H14Q6PJT7 736 aaKnown RBP6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 CABP7Q86V35 215 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 LDHDQ86WU2 507 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 C1QL4Q86Z23 238 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 PLEKHO2Q8TD55 490 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 DIO2Q92813 273 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 CCDC113Q9H0I3 377 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 ARHGEF4Q9NR80 690 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 HCFC2Q9Y5Z7 792 aa6.35□□□□□ -1.39
TRAPPC8-205ENST00000578658 ZC3H12DA2A288 527 aaKnown RBP6.34□□□□□ -1.39
TRAPPC8-205ENST00000578658 F8W031 263 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC8-205ENST00000578658 PDPK1O15530 556 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms