RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 HPSEQ9Y251 543 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 MRVI1Q9Y6F6 885 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 SYCE3A1L190 88 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 GCOM1H8Y6P7 765 aaPredicted RBP21.09■□□□□ 0.97
PRKCA-203ENST00000578063 POLR2MP0CAP2 368 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 GCFC2P16383 781 aaKnown RBP21.09■□□□□ 0.97
PRKCA-203ENST00000578063 PRPHP41219 470 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 PPP4R3AQ6IN85 833 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 OPTNQ96CV9 577 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 AGBL1Q96MI9 1066 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 ADAMTS5Q9UNA0 930 aa21.09■□□□□ 0.97
PRKCA-203ENST00000578063 PARP14Q460N5 1801 aa21.08■□□□□ 0.97
PRKCA-203ENST00000578063 LOC285556D6RIA3 1793 aa21.08■□□□□ 0.97
PRKCA-203ENST00000578063 GRIN1Q05586 938 aa21.08■□□□□ 0.97
PRKCA-203ENST00000578063 CSRNP2Q9H175 543 aa21.08■□□□□ 0.97
PRKCA-203ENST00000578063 TNMDQ9H2S6 317 aa21.08■□□□□ 0.97
PRKCA-203ENST00000578063 RAVER2Q9HCJ3 691 aaKnown RBP21.08■□□□□ 0.97
PRKCA-203ENST00000578063 HOXC10Q9NYD6 342 aa21.08■□□□□ 0.97
PRKCA-203ENST00000578063 PTPRFP10586 1907 aa21.08■□□□□ 0.96
PRKCA-203ENST00000578063 USP11P51784 963 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 MCF2L2Q86YR7 1114 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 CPXCR1Q8N123 301 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 GBA2Q9HCG7 927 aaPredicted RBP21.07■□□□□ 0.96
PRKCA-203ENST00000578063 VWA3AA6NCI4 1184 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 CTAGE5O15320 804 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 CFBP00751 764 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 OR52Z1P0C646 297 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 SREBF1P36956 1147 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 SYKP43405 635 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 GHRHRQ02643 423 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 MOXD1Q6UVY6 613 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 GADL1Q6ZQY3 521 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 SAMD3Q8N6K7 520 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 REPS2Q8NFH8 660 aa21.07■□□□□ 0.96
PRKCA-203ENST00000578063 SPDYE16A6NNV3 312 aaPredicted RBP21.06■□□□□ 0.96
PRKCA-203ENST00000578063 ATP2A1O14983 1001 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 HOXA7P31268 230 aaPredicted RBP21.06■□□□□ 0.96
PRKCA-203ENST00000578063 HOXA13P31271 388 aaPredicted RBP21.06■□□□□ 0.96
PRKCA-203ENST00000578063 LONP1P36776 959 aaKnown RBP21.06■□□□□ 0.96
PRKCA-203ENST00000578063 FMR1Q06787 632 aaKnown RBP eCLIP21.06■□□□□ 0.963e-7■■■■■ 29.9
PRKCA-203ENST00000578063 TREML2Q5T2D2 321 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 LRSAM1Q6UWE0 723 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 DTHD1Q6ZMT9 781 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 CRYGNQ8WXF5 182 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 SLC10A4Q96EP9 437 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 TMEM60Q9H2L4 133 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 EHMT1Q9H9B1 1298 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 KCNH3Q9ULD8 1083 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 RLFQ13129 1914 aa21.06■□□□□ 0.96
PRKCA-203ENST00000578063 EDIL3O43854 480 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 ZNF202O95125 648 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 TDP2O95551 362 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 ALAS1P13196 640 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 ARHGAP4P98171 946 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 RBM43Q6ZSC3 357 aaKnown RBP21.05■□□□□ 0.96
PRKCA-203ENST00000578063 FASTKD5Q7L8L6 764 aaKnown RBP21.05■□□□□ 0.96
PRKCA-203ENST00000578063 C2orf69Q8N8R5 385 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 CLEC4DQ8WXI8 215 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 TIGD1Q96MW7 591 aa21.05■□□□□ 0.96
PRKCA-203ENST00000578063 P2RX7Q99572 595 aaKnown RBP21.05■□□□□ 0.96
PRKCA-203ENST00000578063 MAP3K20Q9NYL2 800 aaKnown RBP21.05■□□□□ 0.96
PRKCA-203ENST00000578063 HSD17B4P51659 736 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 CAMK4Q16566 473 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 WNK4Q96J92 1243 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 DDX25Q9UHL0 483 aaKnown RBP21.04■□□□□ 0.96
PRKCA-203ENST00000578063 AGTPBP1Q9UPW5 1226 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 CYP3A7-CYP3A51PA0A087WV96 503 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 CELF2O95319 508 aaKnown RBP21.04■□□□□ 0.96
PRKCA-203ENST00000578063 CYP3A7P24462 503 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 SNAPC2Q13487 334 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 CALCRLQ16602 461 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 SPECC1Q5M775 1068 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 CHADLQ6NUI6 762 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 MB21D1Q8N884 522 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 TEX13BQ9BXU2 312 aa21.04■□□□□ 0.96
PRKCA-203ENST00000578063 ZNF214Q9UL59 606 aaPredicted RBP21.04■□□□□ 0.96
PRKCA-203ENST00000578063 PABPC4Q13310 644 aaKnown RBP eCLIP21.03■□□□□ 0.96
PRKCA-203ENST00000578063 IL17AQ16552 155 aa21.03■□□□□ 0.96
PRKCA-203ENST00000578063 TKFCQ3LXA3 575 aa21.03■□□□□ 0.96
PRKCA-203ENST00000578063 FCHSD1Q86WN1 690 aa21.03■□□□□ 0.96
PRKCA-203ENST00000578063 SYMPKQ92797 1274 aaKnown RBP21.03■□□□□ 0.96
PRKCA-203ENST00000578063 MBOAT7Q96N66 472 aa21.03■□□□□ 0.96
PRKCA-203ENST00000578063 NFIBO00712 420 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 SLC37A4O43826 429 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 CYP3A4P08684 503 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 IRX3P78415 501 aaPredicted RBP21.02■□□□□ 0.96
PRKCA-203ENST00000578063 TMEM132BQ14DG7 1078 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 SNRNP48Q6IEG0 339 aaKnown RBP21.02■□□□□ 0.96
PRKCA-203ENST00000578063 TBC1D5Q92609 795 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 AK8Q96MA6 479 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 TRERF1Q96PN7 1200 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 MTMR9Q96QG7 549 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 PYM1Q9BRP8 204 aaKnown RBP21.02■□□□□ 0.96
PRKCA-203ENST00000578063 MAF1Q9H063 256 aa21.02■□□□□ 0.96
PRKCA-203ENST00000578063 GOLGA6L3A6NEY3 463 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 GJA5P36382 358 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 TXLNAP40222 546 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 LBX2Q6XYB7 198 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 SDF4Q9BRK5 362 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 HOMER2Q9NSB8 354 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms