RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 ZNF713Q8N859 430 aaPredicted RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 BANK1Q8NDB2 785 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 HNRNPLLQ8WVV9 542 aaKnown RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 ZC3H12CQ9C0D7 883 aaKnown RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 PLEKHA4Q9H4M7 779 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 PASKQ96RG2 1323 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 KRT15P19012 456 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 BCAMP50895 628 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 ZNF131P52739 623 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 EPHA10Q5JZY3 1008 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 SGMS1Q86VZ5 419 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 ELOA2Q8IYF1 753 aaPredicted RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 VPS52Q8N1B4 723 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 MYCT1Q8N699 235 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 DISC1Q9NRI5 854 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 BIN2Q9UBW5 565 aaPredicted RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 NRKQ7Z2Y5 1582 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 BIRC3Q13489 604 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 ANKRD20A3Q5VUR7 823 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 GPIHBP1Q8IV16 184 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 STAG1Q8WVM7 1258 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 IWS1Q96ST2 819 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 EYA3Q99504 573 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 TACO1Q9BSH4 297 aaKnown RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 NDST4Q9H3R1 872 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 DAAM1Q9Y4D1 1078 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 A0A1B0GTH6 734 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 CCDC160A6NGH7 325 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 MOCS3O95396 460 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 H2AFXP16104 143 aaPredicted RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 MAN1A1P33908 653 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 ENGASEQ8NFI3 743 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 CCHCR1Q8TD31 782 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 CNKSR2Q8WXI2 1034 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 PPP1R12CQ9BZL4 782 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 PCDHB13Q9Y5F0 798 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 DLC1Q96QB1 1528 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 EVI5O60447 810 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 KRT5P13647 590 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 GPKOWQ92917 476 aaPredicted RBP eCLIP11.36□□□□□ -0.59
PTPRM-205ENST00000577827 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 ITIH6Q6UXX5 1313 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 GGCXP38435 758 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 CYP27A1Q02318 531 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 LGSNQ5TDP6 509 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 PHLDB3Q6NSJ2 640 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 TBC1D22AQ8WUA7 517 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 FNBP1Q96RU3 617 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 SPZ1Q9BXG8 430 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 HEG1Q9ULI3 1381 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 NRXN1Q9ULB1 1477 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 CTNND1O60716 968 aaKnown RBP11.36□□□□□ -0.59
PTPRM-205ENST00000577827 RASGRP2Q7LDG7 609 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 RPAINQ86UA6 219 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 PAF1Q8N7H5 531 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 ANKRD42Q8N9B4 389 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 VCX3BQ9H321 246 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 SH3GLB2Q9NR46 395 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 RTCBQ9Y3I0 505 aaKnown RBP11.36□□□□□ -0.59
PTPRM-205ENST00000577827 KAT6BQ8WYB5 2073 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 ERBB3P21860 1342 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 GCFC2P16383 781 aaKnown RBP11.36□□□□□ -0.59
PTPRM-205ENST00000577827 ACSBG1Q96GR2 724 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 JPH2Q9BR39 696 aaPredicted RBP11.36□□□□□ -0.59
PTPRM-205ENST00000577827 GJB4Q9NTQ9 266 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 TXNDC16Q9P2K2 825 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 STK38LQ9Y2H1 464 aa11.36□□□□□ -0.59
PTPRM-205ENST00000577827 F8W031 263 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-205ENST00000577827 ABCB4P21439 1286 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 METTL16Q86W50 562 aaKnown RBP11.35□□□□□ -0.59
PTPRM-205ENST00000577827 GBP7Q8N8V2 638 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-205ENST00000577827 DKC1O60832 514 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTPRM-205ENST00000577827 SLC1A4P43007 532 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 RPS8P62241 208 aaKnown RBP11.35□□□□□ -0.59
PTPRM-205ENST00000577827 PLS1Q14651 629 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 RABL6Q3YEC7 729 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-205ENST00000577827 STOX1Q6ZVD7 989 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-205ENST00000577827 DPF2Q92785 391 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 COBLO75128 1261 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 VSNL1P62760 191 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.35□□□□□ -0.591e-6■■■■■ 56.2
PTPRM-205ENST00000577827 SH2D4AQ9H788 454 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 SALL3Q9BXA9 1300 aa11.35□□□□□ -0.59
PTPRM-205ENST00000577827 TEX33O43247 280 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 DHX9Q08211 1270 aaKnown RBP11.34□□□□□ -0.59
PTPRM-205ENST00000577827 E2F4Q16254 413 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 MGARPQ8TDB4 240 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 TGFBRAP1Q8WUH2 860 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 HINFPQ9BQA5 517 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 EPC1Q9H2F5 836 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 CXCR5P32302 372 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 RNASELQ05823 741 aaKnown RBP11.34□□□□□ -0.59
PTPRM-205ENST00000577827 CHRNDQ07001 517 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 ARHGAP44Q17R89 818 aa11.34□□□□□ -0.59
PTPRM-205ENST00000577827 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms