RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 CUL4BQ13620 913 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 KARSQ15046 597 aaKnown RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 CDC37Q16543 378 aaPredicted RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 SLC35G1Q2M3R5 365 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 QRICH1Q2TAL8 776 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 SYDE2Q5VT97 1194 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 FOXR2Q6PJQ5 311 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 KCTD1Q719H9 257 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 MTERF4Q7Z6M4 381 aaKnown RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 PPFIBP1Q86W92 1011 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 CNGA4Q8IV77 575 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 SAMD3Q8N6K7 520 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 CACTINQ8WUQ7 758 aaKnown RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 COA7Q96BR5 231 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 PRMT6Q96LA8 375 aaPredicted RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 MTMR9Q96QG7 549 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 GMLQ99445 158 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 C7orf25Q9BPX7 421 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 DNAJC18Q9H819 358 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 ZNF70Q9UC06 446 aaPredicted RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 PCDHA12Q9UN75 941 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 R3HCC1Q9Y3T6 440 aaKnown RBP7.64□□□□□ -1.19
SMG6-217ENST00000575338 DOCK1Q14185 1865 aa7.64□□□□□ -1.19
SMG6-217ENST00000575338 CYP3A7-CYP3A51PA0A087WV96 503 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 A0A087X0B3 334 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 A0A1B0GTH6 734 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 USP17L10C9JJH3 530 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 PSMD14O00487 310 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 WNT7AO00755 349 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 DYNC1I1O14576 645 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 STX10O60499 249 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 NDUFB10O96000 172 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 GH2P01242 217 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 FDX1P10109 184 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 VEGFAP15692 232 aaPredicted RBP7.63□□□□□ -1.19
SMG6-217ENST00000575338 BMP6P22004 513 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 CYP3A7P24462 503 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 TECP42680 631 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 TXKP42681 527 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 CACNB3P54284 484 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 PTPN14Q15678 1187 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 IL17AQ16552 155 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 NOM1Q5C9Z4 860 aaKnown RBP7.63□□□□□ -1.19
SMG6-217ENST00000575338 CDKAL1Q5VV42 579 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 POTEDQ86YR6 584 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 GRAMD1CQ8IYS0 662 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 GIMAP8Q8ND71 665 aaPredicted RBP7.63□□□□□ -1.19
SMG6-217ENST00000575338 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
SMG6-217ENST00000575338 ANO3Q9BYT9 981 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 TMEM60Q9H2L4 133 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 THAP9Q9H5L6 903 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 VEZTQ9HBM0 779 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 KCNQ5Q9NR82 932 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 NRBP1Q9UHY1 535 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 FEM1BQ9UK73 627 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 CTNND2Q9UQB3 1225 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 TMX2Q9Y320 296 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 MRPL11Q9Y3B7 192 aaKnown RBP7.63□□□□□ -1.19
SMG6-217ENST00000575338 CD2APQ9Y5K6 639 aa7.63□□□□□ -1.19
SMG6-217ENST00000575338 ABCB11O95342 1321 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 A0A087WWV3 80 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 LRRC10BA6NIK2 292 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 PPP1R3GB7ZBB8 358 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 TCP10L2B9ZVM9 353 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 TMEM232C9JQI7 657 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 PIK3CDO00329 1044 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 RAD17O75943 681 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 GDF11O95390 407 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 ATP1A3P13637 1013 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 PLCG1P19174 1290 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 MUTP22033 750 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 ASIC1P78348 528 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 CCZ1BP86790 482 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 CCZ1P86791 482 aaPredicted RBP7.62□□□□□ -1.19
SMG6-217ENST00000575338 PDE4DQ08499 809 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 NR1I3Q14994 352 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 TSR1Q2NL82 804 aaKnown RBP7.62□□□□□ -1.19
SMG6-217ENST00000575338 CCDC144BQ3MJ40 725 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 KMT5BQ4FZB7 885 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 HYIQ5T013 277 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 KLHL10Q6JEL2 608 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 UNC13DQ70J99 1090 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 SH3BP5LQ7L8J4 393 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 ZFPM1Q8IX07 1006 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 MYRIPQ8NFW9 859 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 KIF18AQ8NI77 898 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 SNX29Q8TEQ0 813 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 NELFBQ8WX92 580 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 LPAR1Q92633 364 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 FAM20AQ96MK3 541 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 PANX2Q96RD6 677 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 MAP7D2Q96T17 732 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 TSG101Q99816 390 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 NUP58Q9BVL2 599 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 TRIM9Q9C026 710 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 HSD3B7Q9H2F3 369 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 CPVLQ9H3G5 476 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 VCPKMTQ9H867 229 aa7.62□□□□□ -1.19
SMG6-217ENST00000575338 ZNF277Q9NRM2 450 aaPredicted RBP7.62□□□□□ -1.19
SMG6-217ENST00000575338 MAP3K20Q9NYL2 800 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms