RNA–Protein interactions for RNA: ENST00000574699.1

TNFRSF12A-205, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-205ENST00000574699 JMJD4Q9H9V9 463 aa22.54■■□□□ 1.2
TNFRSF12A-205ENST00000574699 VAT1LQ9HCJ6 419 aa22.54■■□□□ 1.2
TNFRSF12A-205ENST00000574699 PDLIM7Q9NR12 457 aa22.54■■□□□ 1.2
TNFRSF12A-205ENST00000574699 GNEQ9Y223 722 aaKnown RBP22.54■■□□□ 1.2
TNFRSF12A-205ENST00000574699 ELP1O95163 1332 aa22.54■■□□□ 1.2
TNFRSF12A-205ENST00000574699 NKX3-2P78367 333 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 PDE4DQ08499 809 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 TMEM67Q5HYA8 995 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 TAPT1Q6NXT6 567 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 MCF2L2Q86YR7 1114 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 STAG2Q8N3U4 1231 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 LSG1Q9H089 658 aaKnown RBP22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 ANO2Q9NQ90 1003 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 PDGFCQ9NRA1 345 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 MAD2L2Q9UI95 211 aa22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 MRPL11Q9Y3B7 192 aaKnown RBP22.53■■□□□ 1.2
TNFRSF12A-205ENST00000574699 PALM3A6NDB9 673 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 PQBP1O60828 265 aaKnown RBP22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 SMPD1P17405 629 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 IRX5P78411 483 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 GRM4Q14833 912 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 CASC1Q6TDU7 716 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 CHST3Q7LGC8 479 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 SKAP1Q86WV1 359 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 MB21D2Q8IYB1 491 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 VTI1AQ96AJ9 217 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 CCDC136Q96JN2 1154 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 AMNQ9BXJ7 453 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 PCDH10Q9P2E7 1040 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 Q9Y3F1 56 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 MROH7Q68CQ1 1323 aa22.52■■□□□ 1.2
TNFRSF12A-205ENST00000574699 ZEB2O60315 1214 aa22.51■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CLTBP09497 229 aa22.51■■□□□ 1.19
TNFRSF12A-205ENST00000574699 ANKRD33Q7Z3H0 272 aa22.51■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CATIPQ7Z7H3 387 aa22.51■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TOX2Q96NM4 488 aa22.51■■□□□ 1.19
TNFRSF12A-205ENST00000574699 MTA3Q9BTC8 594 aa22.51■■□□□ 1.19
TNFRSF12A-205ENST00000574699 DCDC2CA8MYV0 355 aa22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CTAGE5O15320 804 aa22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 DYNC1LI2O43237 492 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 ANTXR2P58335 489 aa22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 BEX3Q00994 111 aa22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 FSCN1Q16658 493 aaKnown RBP22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 DUSP28Q4G0W2 176 aa22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 WDR11Q9BZH6 1224 aa22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 BAZ2BQ9UIF8 2168 aaKnown RBP22.5■■□□□ 1.19
TNFRSF12A-205ENST00000574699 A0A0U1RQG5 324 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 ZBTB5O15062 677 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 EDNRBP24530 442 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 MCM5P33992 734 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TROAPQ12815 778 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TRAF1Q13077 416 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 SH3RF1Q7Z6J0 888 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 IGDCC4Q8TDY8 1250 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 MTMR8Q96EF0 704 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 SENP2Q9HC62 589 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 KIAA1217Q5T5P2 1943 aa22.49■■□□□ 1.19
TNFRSF12A-205ENST00000574699 LAMA3Q16787 3333 aa22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 RBM47A0AV96 593 aaKnown RBP22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TRIM43BA6NCK2 446 aa22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 SLC27A2O14975 620 aa22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CABYRO75952 493 aa22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 LRIT3Q3SXY7 679 aa22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 NSUN6Q8TEA1 469 aaKnown RBP22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 SCFD2Q8WU76 684 aa22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TRIM43Q96BQ3 446 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF12A-205ENST00000574699 SOX1O00570 391 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 PRC1O43663 620 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 PPP2R5BQ15173 497 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 NECTIN1Q15223 517 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 RNF20Q5VTR2 975 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CREB3L3Q68CJ9 461 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CXCL17Q6UXB2 119 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 HOMER1Q86YM7 354 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 SYTL5Q8TDW5 730 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 BADQ92934 168 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TMEM87BQ96K49 555 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 RIOX1Q9H6W3 641 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 LY9Q9HBG7 655 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TMEM39AQ9NV64 488 aa22.47■■□□□ 1.19
TNFRSF12A-205ENST00000574699 SZT2Q5T011 3432 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 ARVCFO00192 962 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 KIAA0355O15063 1070 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 NKRFO15226 690 aaKnown RBP eCLIP22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CDC45O75419 566 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 DDAH1O94760 285 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CFBP00751 764 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 RAG1P15918 1043 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 FAAP100Q0VG06 881 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TMTC2Q8N394 836 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 CTCFLQ8NI51 663 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TBC1D5Q92609 795 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 LRCH3Q96II8 777 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 RMDN3Q96TC7 470 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 MAP3K14Q99558 947 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 PCDHA1Q9Y5I3 950 aa22.46■■□□□ 1.19
TNFRSF12A-205ENST00000574699 TLR3O15455 904 aaKnown RBP22.45■■□□□ 1.18
TNFRSF12A-205ENST00000574699 NEFLP07196 543 aa22.45■■□□□ 1.18
TNFRSF12A-205ENST00000574699 PTGS1P23219 599 aa22.45■■□□□ 1.18
TNFRSF12A-205ENST00000574699 CPT1AP50416 773 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms