RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PTPDC1A2A3K4 754 aa20.37■□□□□ 0.85
SMG6-214ENST00000573827 PALM3A6NDB9 673 aaPredicted RBP20.37■□□□□ 0.85
SMG6-214ENST00000573827 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
SMG6-214ENST00000573827 FAAP100Q0VG06 881 aa20.37■□□□□ 0.85
SMG6-214ENST00000573827 QRICH1Q2TAL8 776 aa20.37■□□□□ 0.85
SMG6-214ENST00000573827 IFIT1BQ5T764 474 aaKnown RBP20.37■□□□□ 0.85
SMG6-214ENST00000573827 MB21D2Q8IYB1 491 aaPredicted RBP20.37■□□□□ 0.85
SMG6-214ENST00000573827 STARD7Q9NQZ5 370 aa20.37■□□□□ 0.85
SMG6-214ENST00000573827 ADD3Q9UEY8 706 aaKnown RBP20.37■□□□□ 0.85
SMG6-214ENST00000573827 OPLAHO14841 1288 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 PPP1R11O60927 126 aaPredicted RBP20.36■□□□□ 0.85
SMG6-214ENST00000573827 CLTBP09497 229 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 CALML3P27482 149 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 BEX3Q00994 111 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 USH1GQ495M9 461 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 GNASQ5JWF2 1037 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 IQSEC1Q6DN90 963 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 TLK2Q86UE8 772 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 PCSK9Q8NBP7 692 aaKnown RBP20.36■□□□□ 0.85
SMG6-214ENST00000573827 NUP133Q8WUM0 1156 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 MAF1Q9H063 256 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 COL20A1Q9P218 1284 aa20.36■□□□□ 0.85
SMG6-214ENST00000573827 RBM8AQ9Y5S9 174 aaKnown RBP20.36■□□□□ 0.85
SMG6-214ENST00000573827 BAZ2BQ9UIF8 2168 aaKnown RBP20.36■□□□□ 0.85
SMG6-214ENST00000573827 GRIN2DO15399 1336 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 PQBP1O60828 265 aaKnown RBP20.35■□□□□ 0.85
SMG6-214ENST00000573827 GHRHRQ02643 423 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 TROAPQ12815 778 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 DUSP28Q4G0W2 176 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 SLC43A3Q8NBI5 491 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 IGDCC4Q8TDY8 1250 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 BADQ92934 168 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 PRDM5Q9NQX1 630 aaPredicted RBP20.35■□□□□ 0.85
SMG6-214ENST00000573827 TBX21Q9UL17 535 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 Q9Y3F1 56 aa20.35■□□□□ 0.85
SMG6-214ENST00000573827 CHD9Q3L8U1 2897 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 ABCB11O95342 1321 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 GRM4Q14833 912 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 FSCN1Q16658 493 aaKnown RBP20.34■□□□□ 0.85
SMG6-214ENST00000573827 GPR153Q6NV75 609 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 CENPQQ7L2Z9 268 aaPredicted RBP20.34■□□□□ 0.85
SMG6-214ENST00000573827 DNERQ8NFT8 737 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 SYTL5Q8TDW5 730 aaPredicted RBP20.34■□□□□ 0.85
SMG6-214ENST00000573827 GLT1D1Q96MS3 346 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 LBHD1Q9BQE6 289 aaPredicted RBP20.34■□□□□ 0.85
SMG6-214ENST00000573827 ESYT1Q9BSJ8 1104 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 SPC25Q9HBM1 224 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 PRKAG2Q9UGJ0 569 aa20.34■□□□□ 0.85
SMG6-214ENST00000573827 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 ARVCFO00192 962 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 DYNC1LI2O43237 492 aaPredicted RBP20.33■□□□□ 0.85
SMG6-214ENST00000573827 EPHB4P54760 987 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 TRDNQ13061 729 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 BMP2KLQ5H9B9 411 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 C9orf50Q5SZB4 431 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 KIAA1211Q6ZU35 1233 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 CHST3Q7LGC8 479 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 NCOA7Q8NI08 942 aa20.33■□□□□ 0.85
SMG6-214ENST00000573827 IFIT3O14879 490 aaKnown RBP20.32■□□□□ 0.84
SMG6-214ENST00000573827 CYTH3O43739 400 aa20.32■□□□□ 0.84
SMG6-214ENST00000573827 CXCL17Q6UXB2 119 aa20.32■□□□□ 0.84
SMG6-214ENST00000573827 FAM126BQ8IXS8 530 aa20.32■□□□□ 0.84
SMG6-214ENST00000573827 WDR11Q9BZH6 1224 aa20.32■□□□□ 0.84
SMG6-214ENST00000573827 RIOX1Q9H6W3 641 aa20.32■□□□□ 0.84
SMG6-214ENST00000573827 VAT1LQ9HCJ6 419 aa20.32■□□□□ 0.84
SMG6-214ENST00000573827 GPHNQ9NQX3 736 aaPredicted RBP20.32■□□□□ 0.84
SMG6-214ENST00000573827 MYH6P13533 1939 aa20.31■□□□□ 0.84
SMG6-214ENST00000573827 A0A0U1RQG5 324 aaPredicted RBP20.31■□□□□ 0.84
SMG6-214ENST00000573827 CD4P01730 458 aa20.31■□□□□ 0.84
SMG6-214ENST00000573827 SHHQ15465 462 aa20.31■□□□□ 0.84
SMG6-214ENST00000573827 NOL8Q76FK4 1167 aaKnown RBP20.31■□□□□ 0.84
SMG6-214ENST00000573827 FBXO11Q86XK2 927 aa20.31■□□□□ 0.84
SMG6-214ENST00000573827 TAAR1Q96RJ0 339 aa20.31■□□□□ 0.84
SMG6-214ENST00000573827 ZBTB5O15062 677 aa20.3■□□□□ 0.84
SMG6-214ENST00000573827 ARIH2O95376 493 aa20.3■□□□□ 0.84
SMG6-214ENST00000573827 NECTIN1Q15223 517 aa20.3■□□□□ 0.84
SMG6-214ENST00000573827 RALYLQ86SE5 291 aaKnown RBP20.3■□□□□ 0.84
SMG6-214ENST00000573827 AP5M1Q9H0R1 490 aa20.3■□□□□ 0.84
SMG6-214ENST00000573827 LY9Q9HBG7 655 aa20.3■□□□□ 0.84
SMG6-214ENST00000573827 TMEM39AQ9NV64 488 aa20.3■□□□□ 0.84
SMG6-214ENST00000573827 EYSQ5T1H1 3165 aa20.3■□□□□ 0.84
SMG6-214ENST00000573827 DCDC2CA8MYV0 355 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 SLC27A2O14975 620 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 CABYRO75952 493 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 HSD17B4P51659 736 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 WTAPQ15007 396 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 CCDC62Q6P9F0 684 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 AMNQ9BXJ7 453 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 MRPL11Q9Y3B7 192 aaKnown RBP20.29■□□□□ 0.84
SMG6-214ENST00000573827 CUL9Q8IWT3 2517 aa20.29■□□□□ 0.84
SMG6-214ENST00000573827 SCN10AQ9Y5Y9 1956 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 PDE4DQ08499 809 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 TMEM67Q5HYA8 995 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 CREB3L3Q68CJ9 461 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 MCF2L2Q86YR7 1114 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 COPS5Q92905 334 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 PIGSQ96S52 555 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 MTA3Q9BTC8 594 aa20.28■□□□□ 0.84
SMG6-214ENST00000573827 MROH7Q68CQ1 1323 aa20.27■□□□□ 0.84
SMG6-214ENST00000573827 PRUNE2Q8WUY3 3088 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms