RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 MFSD14CQ5VZR4 134 aa11□□□□□ -0.65
NDE1-208ENST00000573694 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
NDE1-208ENST00000573694 GPKOWQ92917 476 aaPredicted RBP eCLIP11□□□□□ -0.65
NDE1-208ENST00000573694 PHF20Q9BVI0 1012 aa11□□□□□ -0.65
NDE1-208ENST00000573694 XRN2Q9H0D6 950 aaKnown RBP eCLIP11□□□□□ -0.65
NDE1-208ENST00000573694 UNC93B1Q9H1C4 597 aa11□□□□□ -0.65
NDE1-208ENST00000573694 VCPKMTQ9H867 229 aa11□□□□□ -0.65
NDE1-208ENST00000573694 GOPCQ9HD26 462 aa11□□□□□ -0.65
NDE1-208ENST00000573694 RTEL1Q9NZ71 1219 aa11□□□□□ -0.65
NDE1-208ENST00000573694 CLIP2Q9UDT6 1046 aa11□□□□□ -0.65
NDE1-208ENST00000573694 OGDHLQ9ULD0 1010 aa11□□□□□ -0.65
NDE1-208ENST00000573694 ADAMTS5Q9UNA0 930 aa11□□□□□ -0.65
NDE1-208ENST00000573694 MKI67P46013 3256 aaKnown RBP11□□□□□ -0.65
NDE1-208ENST00000573694 ADAMTS3O15072 1205 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 PTPREP23469 700 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 U2AF2P26368 475 aaKnown RBP eCLIP10.99□□□□□ -0.65
NDE1-208ENST00000573694 NASPP49321 788 aaPredicted RBP10.99□□□□□ -0.65
NDE1-208ENST00000573694 GNAQP50148 359 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 PFKFB3Q16875 520 aaPredicted RBP10.99□□□□□ -0.65
NDE1-208ENST00000573694 HABP4Q5JVS0 413 aaKnown RBP10.99□□□□□ -0.65
NDE1-208ENST00000573694 OLFML2BQ68BL8 750 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 ATL3Q6DD88 541 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 GPR142Q7Z601 462 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 NOSTRINQ8IVI9 506 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 MSL3Q8N5Y2 521 aaKnown RBP10.99□□□□□ -0.65
NDE1-208ENST00000573694 MKL1Q969V6 931 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 SPZ1Q9BXG8 430 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 NYAP2Q9P242 653 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 RCOR1Q9UKL0 485 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 CFAP45Q9UL16 551 aa10.99□□□□□ -0.65
NDE1-208ENST00000573694 DIS3Q9Y2L1 958 aaKnown RBP10.99□□□□□ -0.65
NDE1-208ENST00000573694 TRIOBPQ9H2D6 2365 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 SYCE3A1L190 88 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 FSD2A1L4K1 749 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 KLRF2D3W0D1 207 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 IGHA2P01877 340 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 SNHG28P0DPA3 235 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 EEF2P13639 858 aaKnown RBP10.98□□□□□ -0.65
NDE1-208ENST00000573694 ELNP15502 786 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 DSG3P32926 999 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 KRT2P35908 639 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 ZNF445P59923 1031 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 ICA1Q05084 483 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 GRB14Q14449 540 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 STK38Q15208 465 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 SAFBQ15424 915 aaKnown RBP eCLIP10.98□□□□□ -0.65
NDE1-208ENST00000573694 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 EARS2Q5JPH6 523 aaKnown RBP10.98□□□□□ -0.65
NDE1-208ENST00000573694 CCDC183Q5T5S1 534 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 ANO1Q5XXA6 986 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 WWC2Q6AWC2 1192 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 TYW1BQ6NUM6 668 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.98□□□□□ -0.65
NDE1-208ENST00000573694 CCDC84Q86UT8 332 aaPredicted RBP10.98□□□□□ -0.65
NDE1-208ENST00000573694 LINC00301Q8NCQ3 95 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 BICD2Q8TD16 824 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 DPF3Q92784 378 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 DEFB118Q96PH6 123 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 TANGO6Q9C0B7 1094 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 GOLPH3LQ9H4A5 285 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 RPAP3Q9H6T3 665 aaPredicted RBP10.98□□□□□ -0.65
NDE1-208ENST00000573694 TXNRD2Q9NNW7 524 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 POLR3EQ9NVU0 708 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.98□□□□□ -0.65
NDE1-208ENST00000573694 BRCA2P51587 3418 aa10.98□□□□□ -0.65
NDE1-208ENST00000573694 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
NDE1-208ENST00000573694 STXBP3O00186 592 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 ATP2A1O14983 1001 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 YEATS4O95619 227 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 XBP1P17861 261 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 BMP8BP34820 402 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 TOB1P50616 345 aaPredicted RBP10.97□□□□□ -0.65
NDE1-208ENST00000573694 ZNF543Q08ER8 600 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 Q3C1V9 767 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 ASPRV1Q53RT3 343 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 GPR153Q6NV75 609 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 HEATR3Q7Z4Q2 680 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 HOMER1Q86YM7 354 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 ACER1Q8TDN7 264 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 TNFRSF25Q93038 417 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 LZTS2Q9BRK4 669 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 SPATC1LQ9H0A9 340 aa10.97□□□□□ -0.65
NDE1-208ENST00000573694 FOXP1Q9H334 677 aaPredicted RBP10.97□□□□□ -0.65
NDE1-208ENST00000573694 SMCHD1A6NHR9 2005 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 MYH7BA7E2Y1 1941 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 PARP14Q460N5 1801 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 GOLGA6L4A6NEF3 574 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 GOLGA6L3A6NEY3 463 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 WNT7AO00755 349 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 SPTLC2O15270 562 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 EVI5O60447 810 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 PLA2G6O60733 806 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 OAZ1P54368 228 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 NLRP5P59047 1200 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 PTPAQ15257 358 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
NDE1-208ENST00000573694 TTBK2Q6IQ55 1244 aa10.96□□□□□ -0.65
NDE1-208ENST00000573694 SIAH1Q8IUQ4 282 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms