RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 CYP2C9P11712 490 aa18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 COL9A1P20849 921 aa18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 SLC16A2P36021 539 aa18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 ALDH5A1P51649 535 aaPredicted RBP18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 RPUSD2Q8IZ73 545 aaKnown RBP18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 TRMT13Q9NUP7 481 aaKnown RBP18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 MUC3AQ02505 3323 aa18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 TANC1Q9C0D5 1861 aa18.99■□□□□ 0.63
HCFC1R1-203ENST00000572355 PTPDC1A2A3K4 754 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 NFIBO00712 420 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 MYL3P08590 195 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 ATP2A2P16615 1042 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 BAATQ14032 418 aaPredicted RBP18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 DUSP28Q4G0W2 176 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 DCAF4Q8WV16 495 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 UHRF1Q96T88 793 aaPredicted RBP18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 RANBP17Q9H2T7 1088 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 TOMM22Q9NS69 142 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 ADD3Q9UEY8 706 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 TTC28Q96AY4 2481 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 TNKSO95271 1327 aa18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 FRMPD2Q68DX3 1309 aaPredicted RBP18.98■□□□□ 0.63
HCFC1R1-203ENST00000572355 MX1P20591 662 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 VPS53Q5VIR6 699 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 SLC30A10Q6XR72 485 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 DEFB128Q7Z7B8 93 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 MORC4Q8TE76 937 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 WDR11Q9BZH6 1224 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 POLR3EQ9NVU0 708 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 PCDHA11Q9Y5I1 949 aa18.97■□□□□ 0.63
HCFC1R1-203ENST00000572355 CALML3P27482 149 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 PURAQ00577 322 aaKnown RBP18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 TTLL4Q14679 1199 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 FAM47CQ5HY64 1035 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 SYDE2Q5VT97 1194 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 OR6J1Q8NGC5 347 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 PPP1R13LQ8WUF5 828 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 VWCEQ96DN2 955 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 GPCPD1Q9NPB8 672 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 CHD7Q9P2D1 2997 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 RAPGEFL1Q9UHV5 662 aa18.96■□□□□ 0.63
HCFC1R1-203ENST00000572355 SUPT20HL2P0C7V6 817 aa18.95■□□□□ 0.62
HCFC1R1-203ENST00000572355 CPT1AP50416 773 aa18.95■□□□□ 0.62
HCFC1R1-203ENST00000572355 RRP12Q5JTH9 1297 aaKnown RBP18.95■□□□□ 0.62
HCFC1R1-203ENST00000572355 TSPYL2Q9H2G4 693 aaPredicted RBP18.95■□□□□ 0.62
HCFC1R1-203ENST00000572355 GPHNQ9NQX3 736 aaPredicted RBP18.95■□□□□ 0.62
HCFC1R1-203ENST00000572355 TCF20Q9UGU0 1960 aaKnown RBP18.95■□□□□ 0.62
HCFC1R1-203ENST00000572355 SCN10AQ9Y5Y9 1956 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 ORC4O43929 436 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 CA3P07451 260 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 PFKMP08237 780 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 PPP2R5BQ15173 497 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 SKIV2LQ15477 1246 aaKnown RBP18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 MTG1Q9BT17 334 aaPredicted RBP18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 ANAPC4Q9UJX5 808 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 PCDHB15Q9Y5E8 787 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 RAD50Q92878 1312 aa18.94■□□□□ 0.62
HCFC1R1-203ENST00000572355 NOVP48745 357 aa18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 TFF2Q03403 129 aa18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 PDE4DQ08499 809 aa18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 TMEM67Q5HYA8 995 aa18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 BTNL9Q6UXG8 535 aa18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 NECAB3Q96P71 396 aaPredicted RBP18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 TMEM47Q9BQJ4 181 aa18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 CERS4Q9HA82 394 aa18.93■□□□□ 0.62
HCFC1R1-203ENST00000572355 RFXAPO00287 272 aa18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 TOP1P11387 765 aaKnown RBP18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 ACTN1P12814 892 aa18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 NBPF20Q3BBV1 942 aa18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 BRDTQ58F21 947 aaPredicted RBP18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 RNF207Q6ZRF8 634 aa18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 COPS5Q92905 334 aa18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 REV3LO60673 3130 aa18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
HCFC1R1-203ENST00000572355 LOC102724159A0A0B4J2E5 919 aa18.91■□□□□ 0.62
HCFC1R1-203ENST00000572355 RBM47A0AV96 593 aaKnown RBP18.91■□□□□ 0.62
HCFC1R1-203ENST00000572355 CHMP4BP1P59074 171 aa18.91■□□□□ 0.62
HCFC1R1-203ENST00000572355 PWP2Q15269 919 aaKnown RBP18.91■□□□□ 0.62
HCFC1R1-203ENST00000572355 CLEC4DQ8WXI8 215 aa18.91■□□□□ 0.62
HCFC1R1-203ENST00000572355 MPHOSPH6Q99547 160 aaKnown RBP18.91■□□□□ 0.62
HCFC1R1-203ENST00000572355 SALL3Q9BXA9 1300 aa18.91■□□□□ 0.62
HCFC1R1-203ENST00000572355 NKRFO15226 690 aaKnown RBP eCLIP18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 GTPBP6O43824 516 aaPredicted RBP18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 PDHBP11177 359 aa18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 RPS6P62753 249 aaKnown RBP18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 SCFD2Q8WU76 684 aa18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 EVI5LQ96CN4 794 aa18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 SLC9A7Q96T83 725 aa18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 FTOQ9C0B1 505 aaKnown RBP eCLIP18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 ZBTB47Q9UFB7 747 aaPredicted RBP18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 PTPRSQ13332 1948 aa18.9■□□□□ 0.62
HCFC1R1-203ENST00000572355 A0A0D9SFI3 127 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 EPOPA6NHQ4 379 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 FGRP09769 529 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 RFC2P35250 354 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 KCNQ1P51787 676 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 HAND2P61296 217 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 ALX1Q15699 326 aa18.89■□□□□ 0.61
HCFC1R1-203ENST00000572355 NFRKBQ6P4R8 1299 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms