RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 LRRC41Q15345 812 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 CCDC144BQ3MJ40 725 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 MCF2L2Q86YR7 1114 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 DNERQ8NFT8 737 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 PIGSQ96S52 555 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 SLC12A7Q9Y666 1083 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 ALPK3Q96L96 1907 aa12.94□□□□□ -0.34
SMG6-206ENST00000570668 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 KBTBD13C9JR72 458 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 H0YGN5 161 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 PGK1P00558 417 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 EDNRBP24530 442 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 GNAQP50148 359 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 GHRHRQ02643 423 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 RNF180Q86T96 592 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 HOMER1Q86YM7 354 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 SYTL5Q8TDW5 730 aaPredicted RBP12.93□□□□□ -0.34
SMG6-206ENST00000570668 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 LENG1Q96BZ8 264 aaPredicted RBP12.93□□□□□ -0.34
SMG6-206ENST00000570668 SPZ1Q9BXG8 430 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 SENP6Q9GZR1 1112 aaPredicted RBP12.93□□□□□ -0.34
SMG6-206ENST00000570668 VTA1Q9NP79 307 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 PCDHA1Q9Y5I3 950 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 SNX14Q9Y5W7 946 aa12.93□□□□□ -0.34
SMG6-206ENST00000570668 DDX49Q9Y6V7 483 aaKnown RBP12.93□□□□□ -0.34
SMG6-206ENST00000570668 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 OPLAHO14841 1288 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 ADCY6O43306 1168 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
SMG6-206ENST00000570668 RANBP2P49792 3224 aaKnown RBP12.92□□□□□ -0.34
SMG6-206ENST00000570668 IQSEC1Q6DN90 963 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 TAPT1Q6NXT6 567 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 SAMD3Q8N6K7 520 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 KLHDC9Q8NEP7 349 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 TCEANC2Q96MN5 208 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 MPHOSPH6Q99547 160 aaKnown RBP12.92□□□□□ -0.34
SMG6-206ENST00000570668 MAP3K20Q9NYL2 800 aaKnown RBP12.92□□□□□ -0.34
SMG6-206ENST00000570668 COL20A1Q9P218 1284 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 PHF24Q9UPV7 400 aa12.92□□□□□ -0.34
SMG6-206ENST00000570668 LRRC37A2A6NM11 1700 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 B4DLN1 442 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 PLEKHA8P1O95397 391 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 RXRAP19793 462 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 ADCYAP1R1P41586 468 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 HSD17B4P51659 736 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 MRPL12P52815 198 aaKnown RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 GJA9P57773 515 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 NKX3-2P78367 333 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 TNFAIP2Q03169 654 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 LRRC26Q2I0M4 334 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 CCSAPQ6IQ19 270 aaPredicted RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 SYNE3Q6ZMZ3 975 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 EEPD1Q7L9B9 569 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 MICU3Q86XE3 530 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 FANCBQ8NB91 859 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 TAAR1Q96RJ0 339 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 TSEN34Q9BSV6 310 aaKnown RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 USP26Q9BXU7 913 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 UPF3AQ9H1J1 476 aaKnown RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 PDGFCQ9NRA1 345 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 BRPF3Q9ULD4 1205 aa12.91□□□□□ -0.34
SMG6-206ENST00000570668 GNEQ9Y223 722 aaKnown RBP12.91□□□□□ -0.34
SMG6-206ENST00000570668 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
SMG6-206ENST00000570668 CFBP00751 764 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 SMPD1P17405 629 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 PSMA5P28066 241 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 PDE4DQ08499 809 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 SNX17Q15036 470 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 RAB11FIP4Q86YS3 637 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 C7orf61Q8IZ16 206 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 FBXL16Q8N461 479 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 NSUN6Q8TEA1 469 aaKnown RBP12.9□□□□□ -0.34
SMG6-206ENST00000570668 RRP36Q96EU6 259 aaKnown RBP12.9□□□□□ -0.34
SMG6-206ENST00000570668 IWS1Q96ST2 819 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 RMDN3Q96TC7 470 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 Q9Y3F1 56 aa12.9□□□□□ -0.34
SMG6-206ENST00000570668 MYADML2A6NDP7 307 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 MOXD2PA6NHM9 499 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 CTAGE5O15320 804 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 ZBTB43O43298 467 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
SMG6-206ENST00000570668 CPA1P15085 419 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 RCAN1P53805 252 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
SMG6-206ENST00000570668 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
SMG6-206ENST00000570668 DUSP28Q4G0W2 176 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 C1orf53Q5VUE5 145 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 SLC39A5Q6ZMH5 540 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 TMTC3Q6ZXV5 915 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms