RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 MYL6BP14649 208 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 ATF4P18848 351 aaPredicted RBP7.79□□□□□ -1.16
UBFD1-209ENST00000569919 SEPT6Q14141 434 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 CC2D1BQ5T0F9 858 aaKnown RBP7.79□□□□□ -1.16
UBFD1-209ENST00000569919 BNC2Q6ZN30 1099 aaPredicted RBP7.79□□□□□ -1.16
UBFD1-209ENST00000569919 SLC51AQ86UW1 340 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 KLHL23Q8NBE8 558 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 GALNT11Q8NCW6 608 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 NEDD1Q8NHV4 660 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 CFAP53Q96M91 514 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 ZC3H12CQ9C0D7 883 aaKnown RBP7.79□□□□□ -1.16
UBFD1-209ENST00000569919 UBP1Q9NZI7 540 aa7.79□□□□□ -1.16
UBFD1-209ENST00000569919 NUP98P52948 1817 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 TM4SF5O14894 197 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 ECEL1O95672 775 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 F13A1P00488 732 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 VIL1P09327 827 aaKnown RBP7.78□□□□□ -1.16
UBFD1-209ENST00000569919 FXR1P51114 621 aaKnown RBP eCLIP7.78□□□□□ -1.16
UBFD1-209ENST00000569919 GRAPQ13588 217 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 KIF4BQ2VIQ3 1234 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 CCDC84Q86UT8 332 aaPredicted RBP7.78□□□□□ -1.16
UBFD1-209ENST00000569919 RASAL3Q86YV0 1011 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 SVOPQ8N4V2 548 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 GRAPLQ8TC17 118 aaPredicted RBP7.78□□□□□ -1.16
UBFD1-209ENST00000569919 KCNB2Q92953 911 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 CDCA5Q96FF9 252 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 EYA3Q99504 573 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 NRSN2Q9GZP1 204 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 ENAMQ9NRM1 1142 aa7.78□□□□□ -1.16
UBFD1-209ENST00000569919 ATP2B1P20020 1258 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 MAOBP27338 520 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 CRKP46108 304 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 PTPN11Q06124 597 aaPredicted RBP7.77□□□□□ -1.17
UBFD1-209ENST00000569919 APOBRQ0VD83 1088 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 SREBF2Q12772 1141 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 DCTN1Q14203 1278 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 SUZ12Q15022 739 aaKnown RBP7.77□□□□□ -1.17
UBFD1-209ENST00000569919 POU4F3Q15319 338 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
UBFD1-209ENST00000569919 MAP4K3Q8IVH8 894 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 FBXO27Q8NI29 283 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 GATAD2BQ8WXI9 593 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 GAL3ST3Q96A11 431 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 SPATA32Q96LK8 384 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 DBNDD1Q9H9R9 158 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 MIS18AQ9NYP9 233 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 GGA3Q9NZ52 723 aa7.77□□□□□ -1.17
UBFD1-209ENST00000569919 FAM221AA4D161 298 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 TLR3O15455 904 aaKnown RBP7.76□□□□□ -1.17
UBFD1-209ENST00000569919 DDX3YO15523 660 aaKnown RBP7.76□□□□□ -1.17
UBFD1-209ENST00000569919 ECE2O60344 883 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 DEAF1O75398 565 aaPredicted RBP7.76□□□□□ -1.17
UBFD1-209ENST00000569919 HCLS1P14317 486 aaPredicted RBP7.76□□□□□ -1.17
UBFD1-209ENST00000569919 INHBEP58166 350 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 NLRP12P59046 1061 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 EIF4A1P60842 406 aaKnown RBP7.76□□□□□ -1.17
UBFD1-209ENST00000569919 HSP90AB3PQ58FF7 597 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 SCARA3Q6AZY7 606 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 AGBL3Q8NEM8 1001 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 UBXN4Q92575 508 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 NKD1Q969G9 470 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 SEC16BQ96JE7 1060 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.76□□□□□ -1.172e-11■□□□□ 8
UBFD1-209ENST00000569919 GINM1Q9NU53 330 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 TRMT112Q9UI30 125 aaKnown RBP7.76□□□□□ -1.17
UBFD1-209ENST00000569919 EFR3BQ9Y2G0 817 aa7.76□□□□□ -1.17
UBFD1-209ENST00000569919 UBE2Q2LH0YL09 131 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 CILPO75339 1184 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 NEFMP07197 916 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 CTSBP07858 339 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 FGRP09769 529 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
UBFD1-209ENST00000569919 CD68P34810 354 aaPredicted RBP7.75□□□□□ -1.17
UBFD1-209ENST00000569919 NF2P35240 595 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 NASPP49321 788 aaPredicted RBP7.75□□□□□ -1.17
UBFD1-209ENST00000569919 ZNF280AP59817 542 aaPredicted RBP7.75□□□□□ -1.17
UBFD1-209ENST00000569919 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBFD1-209ENST00000569919 TCIRG1Q13488 830 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 ANGEL2Q5VTE6 544 aaKnown RBP7.75□□□□□ -1.17
UBFD1-209ENST00000569919 MCF2L2Q86YR7 1114 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 DHX38Q92620 1227 aaKnown RBP7.75□□□□□ -1.17
UBFD1-209ENST00000569919 USP26Q9BXU7 913 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 CACNA2D2Q9NY47 1150 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 POLLQ9UGP5 575 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 SH3TC1Q8TE82 1336 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 PITPNM2Q9BZ72 1349 aa7.75□□□□□ -1.17
UBFD1-209ENST00000569919 DLL1O00548 723 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 ADAM11O75078 769 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 ARHGEF15O94989 841 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 GTF2F1P35269 517 aaKnown RBP eCLIP7.74□□□□□ -1.17
UBFD1-209ENST00000569919 SNRPNP63162 240 aaKnown RBP7.74□□□□□ -1.17
UBFD1-209ENST00000569919 MPP2Q14168 576 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 FOXD4L6Q3SYB3 417 aaPredicted RBP7.74□□□□□ -1.17
UBFD1-209ENST00000569919 SEZ6Q53EL9 994 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 DIEXFQ68CQ4 756 aaKnown RBP7.74□□□□□ -1.17
UBFD1-209ENST00000569919 FOXD4L3Q6VB84 417 aaPredicted RBP7.74□□□□□ -1.17
UBFD1-209ENST00000569919 LINC00114Q6XXX2 140 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 NLRP10Q86W26 655 aa7.74□□□□□ -1.17
UBFD1-209ENST00000569919 SLITRK4Q8IW52 837 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms