RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 TMEM179Q6ZVK1 233 aa5.73□□□□□ -1.49
CNOT1-219ENST00000569882 ANKRD13CQ8N6S4 541 aa5.73□□□□□ -1.49
CNOT1-219ENST00000569882 OTUD7AQ8TE49 926 aaPredicted RBP5.73□□□□□ -1.49
CNOT1-219ENST00000569882 ZNF837Q96EG3 531 aaPredicted RBP5.73□□□□□ -1.49
CNOT1-219ENST00000569882 CCDC17Q96LX7 622 aa5.73□□□□□ -1.49
CNOT1-219ENST00000569882 GAS2L1Q99501 681 aaPredicted RBP5.73□□□□□ -1.49
CNOT1-219ENST00000569882 PAGR1Q9BTK6 254 aa5.73□□□□□ -1.49
CNOT1-219ENST00000569882 CFHR5Q9BXR6 569 aa5.73□□□□□ -1.49
CNOT1-219ENST00000569882 PUS7LQ9H0K6 701 aaKnown RBP5.73□□□□□ -1.49
CNOT1-219ENST00000569882 PHIPQ8WWQ0 1821 aa5.73□□□□□ -1.49
CNOT1-219ENST00000569882 MGAMO43451 1857 aa5.73□□□□□ -1.49
CNOT1-219ENST00000569882 SIPA1L1O43166 1804 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 TSPY3P0CV98 308 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 TSPY8P0CW00 308 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 CYP2D6P10635 497 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 PRMT2P55345 433 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 SOX10P56693 466 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 CCNA1P78396 465 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 MAP3K10Q02779 954 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 NUCB1Q02818 461 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 CENPCQ03188 943 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 IKQ13123 557 aaPredicted RBP5.72□□□□□ -1.49
CNOT1-219ENST00000569882 PLS1Q14651 629 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 SEPT2Q15019 361 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 TREML2Q5T2D2 321 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 OTOP1Q7RTM1 612 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 SLC44A5Q8NCS7 719 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 PI4K2BQ8TCG2 481 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 GTF3C2Q8WUA4 911 aaPredicted RBP5.72□□□□□ -1.49
CNOT1-219ENST00000569882 DYNLL2Q96FJ2 89 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 ESYT1Q9BSJ8 1104 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 WDR18Q9BV38 432 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 R3HDMLQ9H3Y0 253 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 PRM3Q9NNZ6 103 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 DOLKQ9UPQ8 538 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 SLC45A1Q9Y2W3 748 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 HRH3Q9Y5N1 445 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 IVNS1ABPQ9Y6Y0 642 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 LOC285556D6RIA3 1793 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 MYH4Q9Y623 1939 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 MYPNQ86TC9 1320 aa5.72□□□□□ -1.49
CNOT1-219ENST00000569882 DDX60LQ5H9U9 1706 aaKnown RBP5.71□□□□□ -1.49
CNOT1-219ENST00000569882 CYP2D7A0A087X1C5 515 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 TSPY2A6NKD2 308 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 SPATA31C2B4DYI2 1134 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L15C9J2P7 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 PATL2C9JE40 543 aaKnown RBP5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L13C9JLJ4 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L11C9JVI0 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L18D6R9N7 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L22D6RA61 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L17D6RBQ6 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L19D6RCP7 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L20D6RJB6 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 M0R2C6 588 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 RANBP6O60518 1105 aaKnown RBP5.71□□□□□ -1.5
CNOT1-219ENST00000569882 ARHGEF15O94989 841 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 SHMT1P34896 483 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 PHKA2P46019 1235 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 CDK8P49336 464 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 UBXN2AP68543 259 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 MLLT1Q03111 559 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-219ENST00000569882 USP17L24Q0WX57 530 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 MCMDC2Q4G0Z9 681 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 OXLD1Q5BKU9 147 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 RRP12Q5JTH9 1297 aaKnown RBP5.71□□□□□ -1.5
CNOT1-219ENST00000569882 C12orf60Q5U649 245 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 TATDN1Q6P1N9 297 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 CTR9Q6PD62 1173 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 CCDC129Q6ZRS4 1044 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 RNF135Q8IUD6 432 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 SMC5Q8IY18 1101 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 TRIM22Q8IYM9 498 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 SPICE1Q8N0Z3 855 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 RUFY2Q8WXA3 655 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 OSBP2Q969R2 916 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 CCDC136Q96JN2 1154 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 STRBPQ96SI9 672 aaKnown RBP5.71□□□□□ -1.5
CNOT1-219ENST00000569882 ASCC2Q9H1I8 757 aaPredicted RBP5.71□□□□□ -1.5
CNOT1-219ENST00000569882 DNAJC18Q9H819 358 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 KANSL2Q9H9L4 492 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 ETNK1Q9HBU6 452 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 HELLSQ9NRZ9 838 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 MTMR7Q9Y216 660 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 PTPN22Q9Y2R2 807 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 DYRK1BQ9Y463 629 aa5.71□□□□□ -1.5
CNOT1-219ENST00000569882 GSG1L2A8MUP6 293 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 PRDM1O75626 825 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 FLOT1O75955 427 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 IGHDP01880 384 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 CHGBP05060 677 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 AKR1B1P15121 316 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 VCAM1P19320 739 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 GRK4P32298 578 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 HERVK_113P62684 666 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 PPARAQ07869 468 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 RRP1BQ14684 758 aaKnown RBP5.7□□□□□ -1.5
CNOT1-219ENST00000569882 FAM110CQ1W6H9 321 aa5.7□□□□□ -1.5
CNOT1-219ENST00000569882 SHROOM1Q2M3G4 852 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms