RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 NFIBO00712 420 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 ST18O60284 1047 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 DTNBO60941 627 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 PGK1P00558 417 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
UBR1-210ENST00000569337 BAATQ14032 418 aaPredicted RBP10.89□□□□□ -0.67
UBR1-210ENST00000569337 LRRC41Q15345 812 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 USH1GQ495M9 461 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 NFXL1Q6ZNB6 911 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 RNF180Q86T96 592 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 TMTC2Q8N394 836 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 NECAB1Q8N987 351 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 ADD3Q9UEY8 706 aaKnown RBP10.89□□□□□ -0.67
UBR1-210ENST00000569337 SLC12A7Q9Y666 1083 aa10.89□□□□□ -0.67
UBR1-210ENST00000569337 DDAH1O94760 285 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 CALML3P27482 149 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 CDC27P30260 824 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 ADCYAP1R1P41586 468 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
UBR1-210ENST00000569337 CCT2P78371 535 aaKnown RBP10.88□□□□□ -0.67
UBR1-210ENST00000569337 STK3Q13188 491 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 GRM4Q14833 912 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 CDC37Q16543 378 aaPredicted RBP10.88□□□□□ -0.67
UBR1-210ENST00000569337 LRRC26Q2I0M4 334 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 SLC35G1Q2M3R5 365 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 RNF207Q6ZRF8 634 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 CATIPQ7Z7H3 387 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 MICU3Q86XE3 530 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 STAG2Q8N3U4 1231 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 CLEC4DQ8WXI8 215 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 SNX21Q969T3 373 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 ZNF274Q96GC6 653 aaPredicted RBP10.88□□□□□ -0.67
UBR1-210ENST00000569337 JMJD4Q9H9V9 463 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 SPC25Q9HBM1 224 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 NCOA5Q9HCD5 579 aaKnown RBP10.88□□□□□ -0.67
UBR1-210ENST00000569337 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
UBR1-210ENST00000569337 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
UBR1-210ENST00000569337 COL11A1P12107 1806 aaPredicted RBP10.88□□□□□ -0.67
UBR1-210ENST00000569337 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 GOLGA8BA8MQT2 603 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 ZBTB43O43298 467 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 PFKFB2O60825 505 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 DUSP11O75319 330 aaKnown RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 RPS6P62753 249 aaKnown RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 SCRN1Q12765 414 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 ANKRD1Q15327 319 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 QRICH1Q2TAL8 776 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 HABP4Q5JVS0 413 aaKnown RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 SLC39A5Q6ZMH5 540 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 FBXO11Q86XK2 927 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 CMTR1Q8N1G2 835 aaKnown RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 FERMT2Q96AC1 680 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 LENG1Q96BZ8 264 aaPredicted RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 TMX3Q96JJ7 454 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 ZMYND8Q9ULU4 1186 aaPredicted RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 NAP1L2Q9ULW6 460 aaPredicted RBP10.87□□□□□ -0.67
UBR1-210ENST00000569337 PDE4DIPQ5VU43 2346 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 NID2Q14112 1375 aa10.87□□□□□ -0.67
UBR1-210ENST00000569337 ABCB11O95342 1321 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 LOC102724159A0A0B4J2E5 919 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 GOLGA8AA7E2F4 631 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 B4DLN1 442 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 ADAMTS4O75173 837 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 PLEKHA8P1O95397 391 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 CTDNEP1O95476 244 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 SYN1P17600 705 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 ADD1P35611 737 aaKnown RBP10.86□□□□□ -0.67
UBR1-210ENST00000569337 ALDH5A1P51649 535 aaPredicted RBP10.86□□□□□ -0.67
UBR1-210ENST00000569337 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
UBR1-210ENST00000569337 RCAN1P53805 252 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 TNFAIP2Q03169 654 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 PWP2Q15269 919 aaKnown RBP10.86□□□□□ -0.67
UBR1-210ENST00000569337 NTRK3Q16288 839 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 EEPD1Q7L9B9 569 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 MCF2L2Q86YR7 1114 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 IL27Q8NEV9 243 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 GTF3C6Q969F1 213 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 MPHOSPH6Q99547 160 aaKnown RBP10.86□□□□□ -0.67
UBR1-210ENST00000569337 TSEN34Q9BSV6 310 aaKnown RBP10.86□□□□□ -0.67
UBR1-210ENST00000569337 AMNQ9BXJ7 453 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 MAF1Q9H063 256 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 KATNBL1Q9H079 304 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 ATP11BQ9Y2G3 1177 aa10.86□□□□□ -0.67
UBR1-210ENST00000569337 MRPL11Q9Y3B7 192 aaKnown RBP10.86□□□□□ -0.67
UBR1-210ENST00000569337 ASTN1O14525 1302 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 SYNRGQ9UMZ2 1314 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 ZBTB5O15062 677 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 PPFIA3O75145 1194 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 C6orf222P0C671 652 aaPredicted RBP10.85□□□□□ -0.67
UBR1-210ENST00000569337 METAP2P50579 478 aaKnown RBP eCLIP10.85□□□□□ -0.67
UBR1-210ENST00000569337 RTP1P59025 263 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 PDE4DQ08499 809 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms