RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 CTAGE5O15320 804 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 CABYRO75952 493 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 CD4P01730 458 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 CYP21A2P08686 494 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 PCP11498 1178 aaKnown RBP18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 CYP2C18P33260 490 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 NKX3-2P78367 333 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 CTDSPL2Q05D32 466 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 TRDNQ13061 729 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 KRT32Q14532 448 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 RAB30Q15771 203 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 TKFCQ3LXA3 575 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 CXCL17Q6UXB2 119 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 MFSD6Q6ZSS7 791 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 GMCL1Q96IK5 515 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 AP5M1Q9H0R1 490 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 PRDM12Q9H4Q4 367 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 IL23AQ9NPF7 189 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 TOMM22Q9NS69 142 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 MSRAQ9UJ68 235 aa18.11■□□□□ 0.49
SCAMP2-210ENST00000569124 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 ASTN1O14525 1302 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 ZEB2O60315 1214 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 ALAS1P13196 640 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 TFAP4Q01664 338 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 AKNAD1Q5T1N1 836 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 STAG1Q8WVM7 1258 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 PPM1EQ8WY54 764 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 AGBL1Q96MI9 1066 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 TRERF1Q96PN7 1200 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 HIPK3Q9H422 1215 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 CNNM2Q9H8M5 875 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 MYH7BA7E2Y1 1941 aa18.1■□□□□ 0.49
SCAMP2-210ENST00000569124 ZNF536O15090 1300 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 SOWAHBA6NEL2 793 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 ANAPC15P60006 121 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 FSCN1Q16658 493 aaKnown RBP18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 HERVK_113Q902F9 699 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 CHMP4CQ96CF2 233 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 SEZ6LQ9BYH1 1024 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 THEGQ9P2T0 379 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 STX8Q9UNK0 236 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 GNEQ9Y223 722 aaKnown RBP18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 CHD9Q3L8U1 2897 aa18.09■□□□□ 0.49
SCAMP2-210ENST00000569124 TSPY2A6NKD2 308 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 PSMA5P28066 241 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 ITGA7Q13683 1181 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 RRP12Q5JTH9 1297 aaKnown RBP18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 FBXO16Q8IX29 292 aaPredicted RBP18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 SLC43A3Q8NBI5 491 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 KRT23Q9C075 422 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 SNX14Q9Y5W7 946 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 PRRC2BQ5JSZ5 2229 aaKnown RBP18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 TET1Q8NFU7 2136 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 MUC3AQ02505 3323 aa18.08■□□□□ 0.48
SCAMP2-210ENST00000569124 COL4A4P53420 1690 aaPredicted RBP18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 E7EWF7 191 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 TNFRSF10AO00220 468 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 PLA2G6O60733 806 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 FGBP02675 491 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 NT5C2P49902 561 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 KCTD1Q719H9 257 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 EEPD1Q7L9B9 569 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 NCOA7Q8NI08 942 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 KCNB2Q92953 911 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 TBC1D32Q96NH3 1257 aa18.07■□□□□ 0.48
SCAMP2-210ENST00000569124 UMODL1Q5DID0 1318 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 DYNC1LI2O43237 492 aaPredicted RBP18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 SMPD1P17405 629 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 IGFBP4P22692 258 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 NSMFQ6X4W1 530 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 OTOP2Q7RTS6 562 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 RASEFQ8IZ41 740 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 ATXN2LQ8WWM7 1075 aaKnown RBP18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 ESR2Q92731 530 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 NKX2-4Q9H2Z4 354 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 VTA1Q9NP79 307 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 CYP39A1Q9NYL5 469 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 CXXC1Q9P0U4 656 aaPredicted RBP18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 CCPG1Q9ULG6 757 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 PRR12Q9ULL5 1215 aa18.06■□□□□ 0.48
SCAMP2-210ENST00000569124 CHD7Q9P2D1 2997 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 ORC4O43929 436 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 B4GALT4O60513 344 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 RANBP6O60518 1105 aaKnown RBP18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 HMGB1P09429 215 aaKnown RBP18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 CCL23P55773 120 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 CCDC96Q2M329 555 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 MUM1L1Q5H9M0 696 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 IQSEC1Q6DN90 963 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 RCSD1Q6JBY9 416 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 JAKMIP1Q96N16 626 aaKnown RBP18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 NEK1Q96PY6 1258 aa18.05■□□□□ 0.48
SCAMP2-210ENST00000569124 NOC4LQ9BVI4 516 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms