RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PPP1R11O60927 126 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 THBDP07204 575 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 GTF2F1P35269 517 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 GRIA2P42262 883 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 SEPHS1P49903 392 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 CYP4F8P98187 520 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 LAPTM5Q13571 262 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 MBLAC2Q68D91 279 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 EEPD1Q7L9B9 569 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 ZNF605Q86T29 641 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 JAMLQ86YT9 394 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 FBXO15Q8NCQ5 510 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 FAM84AQ96KN4 292 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 NKX2-4Q9H2Z4 354 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 EPB41L4BQ9H329 900 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 LRP2BPQ9P2M1 347 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 FBLN5Q9UBX5 448 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 CUX1P39880 1505 aa5.16□□□□□ -1.58
HMGB1P6-201ENST00000569046 SYNJ2O15056 1496 aa5.15□□□□□ -1.58
HMGB1P6-201ENST00000569046 TBC1D8O95759 1140 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 PLS3P13797 630 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 L1CAMP32004 1257 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 ERVFRD-1P60508 538 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 PRSS53Q2L4Q9 553 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 SYDE1Q6ZW31 735 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 KSR1Q8IVT5 923 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 CKAP2LQ8IYA6 745 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 CRACR2BQ8N4Y2 399 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 NPLOC4Q8TAT6 608 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 FRS2Q8WU20 508 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 TRIM55Q9BYV6 548 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 MCOLN1Q9GZU1 580 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 GOLGA2P5Q9HBQ8 144 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 TNFRSF12AQ9NP84 129 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 CYP26B1Q9NR63 512 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 CLEC1BQ9P126 229 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 MSRB2Q9Y3D2 182 aa5.15□□□□□ -1.59
HMGB1P6-201ENST00000569046 GRIN2BQ13224 1484 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 MAGI1Q96QZ7 1491 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 CEP170Q5SW79 1584 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 A0A1W2PQU0 124 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 OR14I1A6ND48 311 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 PAMP19021 973 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 TACR1P25103 407 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 PPP2R2AP63151 447 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 INF2Q27J81 1249 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 DENND5AQ6IQ26 1287 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 KREMEN2Q8NCW0 462 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 NLGN2Q8NFZ4 835 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 EPN3Q9H201 632 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 KLHL14Q9P2G3 628 aa5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 TMEFF2Q9UIK5 374 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P6-201ENST00000569046 NPHP3-ACAD11A0A0J9YXS1 232 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 C7orf72A4D263 438 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 NUDT19A8MXV4 375 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 ETV2O00321 342 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 SCG5P05408 212 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 C1QTNF9P0C862 333 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 ECI1P42126 302 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 GFRA1P56159 465 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 YBX1P67809 324 aaKnown RBP5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 RBL2Q08999 1139 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 SERINC3Q13530 473 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 CCDC103Q8IW40 242 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 DPF3Q92784 378 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 C1orf159Q96HA4 380 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 SGPP1Q9BX95 441 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 GCM1Q9NP62 436 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 PDLIM7Q9NR12 457 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 GULP1Q9UBP9 304 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 PPP1R1BQ9UD71 204 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 RWDD3Q9Y3V2 267 aa5.13□□□□□ -1.59
HMGB1P6-201ENST00000569046 A0A1W2PQ27 194 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 A0A1W2PQ64 194 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 A0A1W2PQC6 194 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 A0A1W2PQD8 194 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 PEX10O60683 326 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 MPOP05164 745 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 SNRPB2P08579 225 aaKnown RBP5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 DBHP09172 617 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 HOXC12P31275 282 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 VIPR1P32241 457 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 ARL4AP40617 200 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 CORO7P57737 925 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 RPTNQ6XPR3 784 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 SPATC1Q76KD6 591 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 CILP2Q8IUL8 1156 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 TMEM145Q8NBT3 493 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 ST13P5Q8NFI4 369 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 ARMC5Q96C12 935 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 SLC26A8Q96RN1 970 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 MMP19Q99542 508 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 SLC38A3Q99624 504 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 MTA3Q9BTC8 594 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 ARHGEF4Q9NR80 690 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 HCFC2Q9Y5Z7 792 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 ABCA5Q8WWZ7 1642 aa5.12□□□□□ -1.59
HMGB1P6-201ENST00000569046 CCDC85CA6NKD9 419 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 GLI4P10075 376 aa5.11□□□□□ -1.59
HMGB1P6-201ENST00000569046 KCNJ6P48051 423 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms