RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 GPHNQ9NQX3 736 aaPredicted RBP18.6■□□□□ 0.57
HERPUD1-215ENST00000568676 RBM47A0AV96 593 aaKnown RBP18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 RANBP6O60518 1105 aaKnown RBP18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 FGRP09769 529 aa18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 ACTN1P12814 892 aa18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 ATP2A2P16615 1042 aaKnown RBP18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 ALDH5A1P51649 535 aaPredicted RBP18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 PSMC6P62333 389 aa18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 CCDC96Q2M329 555 aa18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 TICAM2Q86XR7 235 aa18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 UHRF1Q96T88 793 aaPredicted RBP18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 WDR11Q9BZH6 1224 aa18.59■□□□□ 0.57
HERPUD1-215ENST00000568676 TNKSO95271 1327 aa18.58■□□□□ 0.57
HERPUD1-215ENST00000568676 ZBBXA8MT70 800 aa18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 B4DLN1 442 aa18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 POU3F3P20264 500 aaPredicted RBP18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 MX1P20591 662 aa18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 COL9A1P20849 921 aa18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 MRPL12P52815 198 aaKnown RBP18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 PURAQ00577 322 aaKnown RBP18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 CCDC85BQ15834 202 aaPredicted RBP18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 PHOSPHO2Q8TCD6 241 aa18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 MTG1Q9BT17 334 aaPredicted RBP18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 TCP11L1Q9NUJ3 509 aa18.58■□□□□ 0.56
HERPUD1-215ENST00000568676 PITPNM1O00562 1244 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 TOP1P11387 765 aaKnown RBP18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 CTDSPL2Q05D32 466 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 PTPN11Q06124 597 aaPredicted RBP18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 BAATQ14032 418 aaPredicted RBP18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 ALX1Q15699 326 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 TMEM67Q5HYA8 995 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 SYDE2Q5VT97 1194 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 NFRKBQ6P4R8 1299 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 DNERQ8NFT8 737 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 SCLYQ96I15 445 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 SLC9A7Q96T83 725 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 MAF1Q9H063 256 aa18.57■□□□□ 0.56
HERPUD1-215ENST00000568676 PTPDC1A2A3K4 754 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 FOXP2O15409 715 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 GTPBP6O43824 516 aaPredicted RBP18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 NMT2O60551 498 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 RABGGTBP53611 331 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 SNAP25P60880 206 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 OR6J1Q8NGC5 347 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 SCFD2Q8WU76 684 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 HELLSQ9NRZ9 838 aa18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
HERPUD1-215ENST00000568676 WDR19Q8NEZ3 1342 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 CHD9Q3L8U1 2897 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 GBF1Q92538 1859 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 MYL3P08590 195 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 PCP11498 1178 aaKnown RBP18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 PDE4DQ08499 809 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 PPP2R5BQ15173 497 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 RNF207Q6ZRF8 634 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 RETREG2Q8NC44 543 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 CHMP4CQ96CF2 233 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 EVI5LQ96CN4 794 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 VWCEQ96DN2 955 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 TTC14Q96N46 770 aa18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 ZBTB47Q9UFB7 747 aaPredicted RBP18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 DDX49Q9Y6V7 483 aaKnown RBP18.55■□□□□ 0.56
HERPUD1-215ENST00000568676 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 A6NJR5 290 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 KIF28PB7ZC32 967 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 NFIBO00712 420 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 CYP2C9P11712 490 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 PTGS1P23219 599 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 EDNRBP24530 442 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 BFSP2Q13515 415 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 TMEM63BQ5T3F8 832 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 PURBQ96QR8 312 aaKnown RBP18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 TMEM47Q9BQJ4 181 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 MTMR7Q9Y216 660 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 LCTP09848 1927 aa18.54■□□□□ 0.56
HERPUD1-215ENST00000568676 BAIAP3O94812 1187 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 CALML3P27482 149 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 SLC16A2P36021 539 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 NT5C2P49902 561 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 MYO9BQ13459 2157 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 TTLL4Q14679 1199 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 NBPF20Q3BBV1 942 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 FAM47CQ5HY64 1035 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 TTBK2Q6IQ55 1244 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 RASGRP2Q7LDG7 609 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 RGS22Q8NE09 1264 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 CLEC4DQ8WXI8 215 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 C1QTNF1Q9BXJ1 281 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 INCENPQ9NQS7 918 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 TOMM22Q9NS69 142 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 COG5Q9UP83 839 aa18.53■□□□□ 0.56
HERPUD1-215ENST00000568676 CA3P07451 260 aa18.52■□□□□ 0.56
HERPUD1-215ENST00000568676 IQCF3P0C7M6 154 aa18.52■□□□□ 0.56
HERPUD1-215ENST00000568676 PDHBP11177 359 aa18.52■□□□□ 0.56
HERPUD1-215ENST00000568676 BMP1P13497 986 aa18.52■□□□□ 0.56
HERPUD1-215ENST00000568676 MYOGP15173 224 aa18.52■□□□□ 0.56
HERPUD1-215ENST00000568676 DEFB128Q7Z7B8 93 aa18.52■□□□□ 0.56
HERPUD1-215ENST00000568676 CCDC155Q8N6L0 562 aa18.52■□□□□ 0.56
HERPUD1-215ENST00000568676 SALL3Q9BXA9 1300 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 PARNO95453 639 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms