RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 LEKR1Q6ZMV7 388 aa20.45■□□□□ 0.86
PKD1-235ENST00000568591 MSL3Q8N5Y2 521 aaKnown RBP20.45■□□□□ 0.86
PKD1-235ENST00000568591 TMEM260Q9NX78 707 aa20.45■□□□□ 0.86
PKD1-235ENST00000568591 PALM3A6NDB9 673 aaPredicted RBP20.45■□□□□ 0.86
PKD1-235ENST00000568591 CYLC1P35663 651 aaPredicted RBP20.45■□□□□ 0.86
PKD1-235ENST00000568591 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
PKD1-235ENST00000568591 COG1Q8WTW3 980 aa20.45■□□□□ 0.86
PKD1-235ENST00000568591 RREB1Q92766 1687 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 EIF3CLB5ME19 914 aaKnown RBP20.44■□□□□ 0.86
PKD1-235ENST00000568591 AMIGO3Q86WK7 504 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 DAGLBQ8NCG7 672 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 GLIS3Q8NEA6 775 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 EIF3CQ99613 913 aaKnown RBP20.44■□□□□ 0.86
PKD1-235ENST00000568591 TCP11L1Q9NUJ3 509 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 ZNHIT6Q9NWK9 470 aaKnown RBP20.44■□□□□ 0.86
PKD1-235ENST00000568591 ARHGAP20Q9P2F6 1191 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 PRPF6O94906 941 aaKnown RBP20.44■□□□□ 0.86
PKD1-235ENST00000568591 RASA1P20936 1047 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 CXCR5P32302 372 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 CCDC96Q2M329 555 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 LRRC31Q6UY01 552 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 DYMQ7RTS9 669 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 SRLQ86TD4 932 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 CCDC155Q8N6L0 562 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 NLRP3Q96P20 1036 aa20.44■□□□□ 0.86
PKD1-235ENST00000568591 BIN2Q9UBW5 565 aaPredicted RBP20.44■□□□□ 0.86
PKD1-235ENST00000568591 RRP15Q9Y3B9 282 aaKnown RBP20.44■□□□□ 0.86
PKD1-235ENST00000568591 SMCO2A6NFE2 343 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 GGCXP38435 758 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 NBPF5PQ86XG9 351 aaPredicted RBP20.43■□□□□ 0.86
PKD1-235ENST00000568591 C2CD5Q86YS7 1000 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 ZNF444Q8N0Y2 327 aaPredicted RBP20.43■□□□□ 0.86
PKD1-235ENST00000568591 ANKRD13CQ8N6S4 541 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 ANKS1AQ92625 1134 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
PKD1-235ENST00000568591 MOCS3O95396 460 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 TXKP42681 527 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 SLC10A5Q5PT55 438 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 SELENOOQ9BVL4 669 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 TRIM34Q9BYJ4 488 aa20.43■□□□□ 0.86
PKD1-235ENST00000568591 NUTM2BA6NNL0 878 aaPredicted RBP20.42■□□□□ 0.86
PKD1-235ENST00000568591 NUTM2EB1AL46 878 aaPredicted RBP20.42■□□□□ 0.86
PKD1-235ENST00000568591 AGPSO00116 658 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 MATR3P43243 847 aaKnown RBP eCLIP20.42■□□□□ 0.86
PKD1-235ENST00000568591 TBCKQ8TEA7 893 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 SECISBP2LQ93073 1101 aaKnown RBP20.42■□□□□ 0.86
PKD1-235ENST00000568591 CCDC42Q96M95 316 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 UBA5Q9GZZ9 404 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 ZMYND12Q9H0C1 365 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 SALL4Q9UJQ4 1053 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 IRS2Q9Y4H2 1338 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 IPO7O95373 1038 aaKnown RBP20.42■□□□□ 0.86
PKD1-235ENST00000568591 LDHBP07195 334 aaKnown RBP20.42■□□□□ 0.86
PKD1-235ENST00000568591 PRPHP41219 470 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 VAV2P52735 878 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 FKBP15Q5T1M5 1219 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 CREG2Q8IUH2 290 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 ZSCAN29Q8IWY8 852 aaPredicted RBP20.42■□□□□ 0.86
PKD1-235ENST00000568591 C7orf25Q9BPX7 421 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 MED4Q9NPJ6 270 aa20.42■□□□□ 0.86
PKD1-235ENST00000568591 NCK2O43639 380 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 MYL1P05976 194 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 TM4SF1P30408 202 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 SLC7A5Q01650 507 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 KIF5AQ12840 1032 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 NFRKBQ6P4R8 1299 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 RRP36Q96EU6 259 aaKnown RBP20.41■□□□□ 0.86
PKD1-235ENST00000568591 PIGSQ96S52 555 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 DMGDHQ9UI17 866 aaKnown RBP20.41■□□□□ 0.86
PKD1-235ENST00000568591 MYMKA6NI61 221 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 AARSP49588 968 aaKnown RBP eCLIP20.41■□□□□ 0.862e-7■■■■□ 26.2
PKD1-235ENST00000568591 GNAQP50148 359 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 NFIXQ14938 502 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 NONOQ15233 471 aaKnown RBP eCLIP20.41■□□□□ 0.86
PKD1-235ENST00000568591 CCNI2Q6ZMN8 369 aaPredicted RBP20.41■□□□□ 0.86
PKD1-235ENST00000568591 CCDC170Q8IYT3 715 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 NOC3LQ8WTT2 800 aaKnown RBP20.41■□□□□ 0.86
PKD1-235ENST00000568591 GJA10Q969M2 543 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 ERGIC2Q96RQ1 377 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 NUDT12Q9BQG2 462 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 BLOC1S4Q9NUP1 217 aa20.41■□□□□ 0.86
PKD1-235ENST00000568591 CWC15Q9P013 229 aaKnown RBP20.41■□□□□ 0.86
PKD1-235ENST00000568591 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
PKD1-235ENST00000568591 WNK3Q9BYP7 1800 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 BICDL2A1A5D9 508 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 TUBBP07437 444 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 LRRC41Q15345 812 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 ZNF662Q6ZS27 426 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 EHBP1Q8NDI1 1231 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 UIMC1Q96RL1 719 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 LRRC1Q9BTT6 524 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 NUP58Q9BVL2 599 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 IFIH1Q9BYX4 1025 aaKnown RBP20.4■□□□□ 0.86
PKD1-235ENST00000568591 MMRN2Q9H8L6 949 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 RSPH14Q9UHP6 348 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 EIF4A3P38919 411 aaKnown RBP20.4■□□□□ 0.86
PKD1-235ENST00000568591 GRB10Q13322 594 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
PKD1-235ENST00000568591 NEK8Q86SG6 692 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 SETDB2Q96T68 719 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms